PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000191680
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 436aa    MW: 48394.4 Da    PI: 7.6328
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000191680genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24e-182675356
            AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                   ++ Vr ++ +gr++AeIrdp   gk+ r++lg+f++aeeAa+a+++a+++l+g+
  MDP0000191680 26 FRXVRKRP-WGRYAAEIRDP---GKKSRIWLGTFDSAEEAARAYDNAARELRGA 75
                   788*****.**********8...557**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.1942582IPR001471AP2/ERF domain
CDDcd000181.41E-292584No hitNo description
SMARTSM003805.0E-352588IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-302584IPR001471AP2/ERF domain
PRINTSPR003679.3E-92637IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-202684IPR016177DNA-binding domain
PfamPF008477.0E-112874IPR001471AP2/ERF domain
PRINTSPR003679.3E-94864IPR001471AP2/ERF domain
SMARTSM003800.002390134IPR001471AP2/ERF domain
PROSITE profilePS510328.79497128IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.2E-797128IPR001471AP2/ERF domain
SuperFamilySSF522001.57E-35178329IPR000157Toll/interleukin-1 receptor homology (TIR) domain
Gene3DG3DSA:3.40.50.101402.6E-18186307IPR000157Toll/interleukin-1 receptor homology (TIR) domain
PROSITE profilePS5010423.67187327IPR000157Toll/interleukin-1 receptor homology (TIR) domain
SMARTSM002555.9E-34188327IPR000157Toll/interleukin-1 receptor homology (TIR) domain
PfamPF015821.1E-40189360IPR000157Toll/interleukin-1 receptor homology (TIR) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007165Biological Processsignal transduction
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MDPTSKSPPP ISRSGDRNPA SNEIQFRXVR KRPWGRYAAE IRDPGKKSRI WLGTFDSAEE  60
AARAYDNAAR ELRGAKAKTN FPASAENLLE RPSGSEGTFN SAEEAARAYD VAARGLRDVK  120
ATADLNLPAP SDHQLERPSG SKRIVQVQQQ LTDTSTVTSL GPPSPSPSAI STTTSSSSSS  180
SSSIEDEIYD VFLSFSGEDT RKTFTDHLYW TLKAARVDAF IEEKESTRGG EEKASEKVKQ  240
AIQGSKMAVI IFSRRYADST RCLEELVEIM ECKRTLRLMV LPIFYDVDPS DVKXQSGIFA  300
EAFEKHEDHK EEKLGRWRKA VSEAADLAGE VFTKTDGYEG VFIRKVIDEI TGKLKMKXTS  360
LGGATGQSVQ EIRLFGVPLX VTCRVVPQYT FYIIVNPQST TSFRIAQGFC THDFPVHVSN  420
HIMHHQIAFS INSYKA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5ku7_A7e-411893628177TIR-NB-LRR type resistance protein RPV1
5ku7_B7e-411893628177TIR-NB-LRR type resistance protein RPV1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.6890.0fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324670.0GU732467.1 Malus x domestica AP2 domain class transcription factor (AP2D43) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008378510.30.0TMV resistance protein N
TrEMBLA0A0H3Y9A10.0A0A0H3Y9A1_9ROSA; Transcription factor ERF14
STRINGXP_008378510.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3910
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-21erf domain protein 9