PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000153866
Common NameDREB2-4
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 491aa    MW: 55264 Da    PI: 4.7863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000153866genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1769129155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpse..ng.....krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    + ++GVr++  +g+WvAeIr+p     g     k++r +lg+f ta+eAa a+++a+++++g
  MDP0000153866  69 CVFRGVRQRT-WGKWVAEIREPIRarAGsvptkKNRRLWLGTFPTAYEAALAYDKAARAIYG 129
                    689****999.**********65556448**9666***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-1169129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.7E-2870139IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-1870139IPR016177DNA-binding domain
SMARTSM003801.1E-3270143IPR001471AP2/ERF domain
PROSITE profilePS5103222.02370137IPR001471AP2/ERF domain
PRINTSPR003678.5E-97182IPR001471AP2/ERF domain
CDDcd000189.80E-2971139No hitNo description
PRINTSPR003678.5E-9103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MESEASDGER KLRKRRNGCE SIEDTLTKWK NYNERLDSGK DGGKKTRAPA KGSRKGCMRG  60
KGGPENSDCV FRGVRQRTWG KWVAEIREPI RARAGSVPTK KNRRLWLGTF PTAYEAALAY  120
DKAARAIYGA LARLNFPDNA VDSKDYYSNS VSSKTPSSHE SSLTYNNADX AGGRSGFFED  180
CVAKEQKQET DCSVSEELHV LRATSREPKA VKCEYETERE LVKNDDVFQT ESYGSFDHRG  240
DYLPNEPLVV NFDTVFDCKP CNDMDPLEXL LRSNYDYLTE LVDGECNRRN SCKPSNDVKV  300
ETPAMREAAE KPFPVILESG SHNGXDEKYN NIHGEQINAA EILVTNFEPS EDVEMKLSMT  360
NQELQGGFAE TTRLDGHNCN GFIHSYACLD DLDVAYGPRY GINPWNDIGM QTELDDRLDY  420
VHNWSAEETY GIDAAEDQQW GRTHNLPIQL QTQPHPDIPG SSNHTEYAHL GVDIDRQSYD  480
SGAMEEQGLP K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1571137360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ6698190.0JQ669819.1 Malus x domestica dehydration-responsive element-binding protein (DREB2) (DREB2-4) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008370188.20.0uncharacterized protein LOC103433697
TrEMBLI1Z6760.0I1Z676_MALDO; Dehydration-responsive element-binding protein (DREB2) (Fragment)
STRINGXP_008370188.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.19e-29ERF family protein
Publications ? help Back to Top
  1. Zhao T,Liang D,Wang P,Liu J,Ma F
    Genome-wide analysis and expression profiling of the DREB transcription factor gene family in Malus under abiotic stress.
    Mol. Genet. Genomics, 2012. 287(5): p. 423-36
    [PMID:22526429]