PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000149352
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family SAP
Protein Properties Length: 449aa    MW: 50146.6 Da    PI: 7.65
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000149352genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP624.42.4e-1907444775454
            SAP  75 nvfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadG 170
                    +v  vcstwravsrs+llw+rltrriW rt l+rdtWr+eyiy+hrta+nfrt r++++tl+fd +dv++   +d l+Crcl+lsd +la+GfadG
  MDP0000149352  74 TVCSVCSTWRAVSRSNLLWHRLTRRIWGRTILIRDTWRDEYIYWHRTATNFRTPRSAHTTLHFDLSDVED---PDGLTCRCLTLSDAHLACGFADG 166
                    6889*************************************************************98887...699******************** PP

            SAP 171 avrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpG 266
                    avrlfdl+trlhvstf+p+ rdrlGrfsrav+Giv++d +l+fatldGdihvavi+g     +rra+lGdvvndG+lvdf+Gs+rWwvGlyaGvpG
  MDP0000149352 167 AVRLFDLATRLHVSTFRPHLRDRLGRFSRAVTGIVMTDFTLTFATLDGDIHVAVING--PQVTRRAHLGDVVNDGVLVDFTGSERWWVGLYAGVPG 260
                    *********************************************************..679********************************** PP

            SAP 267 rafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvds 362
                    r+fhiWd+ te+l+fvGG+l dPeavmGWhmlte+te+vGrvrvt+retavaCts r++vfdlrnqg+vl  ee rrG+iv++ d+s +ay++v +
  MDP0000149352 261 RTFHIWDGLTEQLTFVGGTLSDPEAVMGWHMLTEMTEAVGRVRVTSRETAVACTSARVIVFDLRNQGIVLS-EEYRRGIIVGAADVSRSAYIIVGR 355
                    **********************************************************************9.7899******************** PP

            SAP 363 rGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                    rG a+vr  ++leevcrf+vrg aq  v+gC+n g al++ ggv+rvWe+e+ + ylys+rer+gevnalv d+rhva++s  + +hl+dfga
  MDP0000149352 356 RGLASVRWSDTLEEVCRFNVRGaAQMAVMGCMNEGCALMCVGGVVRVWEVERGA-YLYSFRERIGEVNALVCDERHVAACSGGTRLHLWDFGA 447
                    **********************99****************************77.*************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813835.89E-875127IPR001810F-box domain
Gene3DG3DSA:1.20.1280.502.8E-475134No hitNo description
Gene3DG3DSA:2.130.10.103.9E-11144252IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509783.97E-13145346IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.103.9E-11288357IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509783.97E-13388444IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.103.9E-11398445IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MSFLPHSFYW LIFLPHSSLT LPQPLFSYYV PCXSPPYSVY SFSGSADCQL SCLPSGXTFK  60
XLSVSLGFTR MASTVCSVCS TWRAVSRSNL LWHRLTRRIW GRTILIRDTW RDEYIYWHRT  120
ATNFRTPRSA HTTLHFDLSD VEDPDGLTCR CLTLSDAHLA CGFADGAVRL FDLATRLHVS  180
TFRPHLRDRL GRFSRAVTGI VMTDFTLTFA TLDGDIHVAV INGPQVTRRA HLGDVVNDGV  240
LVDFTGSERW WVGLYAGVPG RTFHIWDGLT EQLTFVGGTL SDPEAVMGWH MLTEMTEAVG  300
RVRVTSRETA VACTSARVIV FDLRNQGIVL SEEYRRGIIV GAADVSRSAY IIVGRRGLAS  360
VRWSDTLEEV CRFNVRGAAQ MAVMGCMNEG CALMCVGGVV RVWEVERGAY LYSFRERIGE  420
VNALVCDERH VAACSGGTRL HLWDFGAAD
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028953353.10.0transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-167SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A498H9130.0A0A498H913_MALDO; Uncharacterized protein
STRINGXP_008365241.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-149SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]