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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000148294 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
GRAS |
Protein Properties |
Length: 460aa MW: 52223.2 Da PI: 4.6059 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000148294 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 132.9 | 3.6e-41 | 95 | 457 | 7 | 374 |
GRAS 7 ecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
++ ea++ g+ el +L l e ++p g++++Rla+ + + + ++ + +++ s++ a++lf++++P+ +f+h +aN aI
MDP0000148294 95 AFGEAMEMGQRELEVVILRCLVEKVNPLGQSLERLAFNLCQEVVDHQQG-----------DHLKQECSKNFEVAFNLFYQIFPFGRFAHYAANTAI 179
5566777777777777888888888888888888887765544444444...........3333344677788999******************** PP
GRAS 103 leavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
leav ++ e+vH++ fd+++G+Q L++aLa+R++ lR+T+++ ++ + + eet+++L++ A+++g++++ + + +edl +
MDP0000148294 180 LEAVPEDvEMVHVVEFDMGEGVQLSQLIEALAKRNKA---LRVTAIKWDVEEsdevapPQWRFEETKRQLQHHARSFGLNLKVEEI---PIEDL-V 268
****9999**************************876...******976555668899999***********************98...66666.3 PP
GRAS 192 eeL.rvkp....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk....vvvvveqe..adh.nsesFlerflealeyysalfdsleakl 275
+++ +v++ +E la n+++ l ++ + ++ e+L+l k+l ++ ++++ + + a++ n++sF f + + +y al++sle+++
MDP0000148294 269 SKIkKVNKrggmREFLAFNSMVGLPHMR--RRRSRGLLMEFLRLAKDLLANsargIITFGDGDacAKReNDSSFSSLFDSNVVHYKALLESLESSF 362
333133335588**************97..4444445799********87655669*****99765668*************************** PP
GRAS 276 pres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvs 369
p + e+r+++E +++++ +++ e+ + + +l+ W +G++ ++s ++ ++ak ++ +s g rv e+ +++ l W++ pL+
MDP0000148294 363 PIHLgEARMVMELMFVAPYVSSQAWFEKWNESREGGNLQPW------FGLEGRRVSREMLMEAKEIVGADSSYGVRVGgEDGNEMALEWNSIPLIR 452
*999899**********************988888899999......8*****************************978888999********** PP
GRAS 370 vSaWr 374
v W+
MDP0000148294 453 VETWT 457
*9995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 460 aa
Download sequence Send
to blast |
MAEEEFPMEL GGFETNYLIR EIENMYASCL EGSEGSNTLP SQQFSVEGND VWSPNSFVTS 60 EASSMDGTSI QQSLILPRDE MEIDNEVSIL HLVKAFGEAM EMGQRELEVV ILRCLVEKVN 120 PLGQSLERLA FNLCQEVVDH QQGDHLKQEC SKNFEVAFNL FYQIFPFGRF AHYAANTAIL 180 EAVPEDVEMV HVVEFDMGEG VQLSQLIEAL AKRNKALRVT AIKWDVEESD EVAPPQWRFE 240 ETKRQLQHHA RSFGLNLKVE EIPIEDLVSK IKKVNKRGGM REFLAFNSMV GLPHMRRRRS 300 RGLLMEFLRL AKDLLANSAR GIITFGDGDA CAKRENDSSF SSLFDSNVVH YKALLESLES 360 SFPIHLGEAR MVMELMFVAP YVSSQAWFEK WNESREGGNL QPWFGLEGRR VSREMLMEAK 420 EIVGADSSYG VRVGGEDGNE MALEWNSIPL IRVETWTNRS
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