PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000129941
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 265aa    MW: 30453.1 Da    PI: 9.7477
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000129941genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.55e-11140181351
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  MDP0000129941 140 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 181
                    79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.6E-4139196IPR001471AP2/ERF domain
PfamPF008472.4E-5139182IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-7140184IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-6142186IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MVSLRRRRLL GLGLCCEIPP VLDPLPRVAN NGTTPQNFXR TNPVSVHPMP SNDANQPDGQ  60
AWQGTKRKMV RWNDHLIKPE NRFHNDNISF NNTIVKAEPR SLTASGSILS KEQHDVAGPP  120
IKRRKRHRRK HAQNQEPCLM RGVYFKNMKW QAAIKVDKKQ IHLGTVGSQE EAAHLYDRAA  180
FMCGREPNFE LSEGEKQELR KFKWDEFLVM TRHAITNKKH RRRQGAESEK RSESPQLEDG  240
DWEDDKEEVN GLSASEGAEQ DMLDS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008355008.21e-148ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A498JXZ51e-119A0A498JXZ5_MALDO; Uncharacterized protein
STRINGXP_008355004.11e-145(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-45ERF family protein