PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000121314 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | SAP | ||||||||
Protein Properties | Length: 108aa MW: 11144.8 Da PI: 8.0506 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 97.9 | 1.2e-30 | 13 | 101 | 2 | 86 |
SAP 2 ssssssssseseegseggeggdass....gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwrav 86 sssssssss++++g+++ ++ + ss g+ e psssr+r++nevwpePf+eala+qvai+asrs+Grlaaa+alanvfq+c + v MDP0000121314 13 SSSSSSSSSHDGNGNDSANAAGPSSvrrgGDLEXPSSSRRRSVNEVWPEPFVEALAAQVAIEASRSVGRLAAAPALANVFQLCCNVKYV 101 556666666666666666666655589999*****************************************************987766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence Send to blast |
MSTSYSSAPS STSSSSSSSS SHDGNGNDSA NAAGPSSVRR GGDLEXPSSS RRRSVNEVWP 60 EPFVEALAAQ VAIEASRSVG RLAAAPALAN VFQLCCNVKY VKNCVLXI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028963350.1 | 6e-42 | transcriptional regulator STERILE APETALA-like | ||||
TrEMBL | A0A498J5W4 | 1e-40 | A0A498J5W4_MALDO; Uncharacterized protein | ||||
STRING | XP_009343485.1 | 4e-36 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 3e-13 | SAP family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000121314 |