PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_AchrUn_randomP25380_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | NAC | ||||||||
Protein Properties | Length: 34aa MW: 4136.61 Da PI: 7.5279 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 26.9 | 1.3e-08 | 6 | 34 | 55 | 83 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyW 83 e+ewyfFs+rd ky++g+r+n a +gyW GSMUA_AchrUn_randomP25380_001 6 EEEWYFFSPRDLKYPKGSRPNWASGTGYW 34 679************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.329 | 1 | 34 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-9 | 6 | 34 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 34 aa Download sequence Send to blast |
MTLHVEEEWY FFSPRDLKYP KGSRPNWASG TGYW |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M0UC96 | 3e-17 | M0UC96_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_AchrUn_randomP25380_001 | 5e-18 | (Musa acuminata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 2e-14 | NAC family protein |