PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P06540_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 244aa    MW: 27039.6 Da    PI: 9.4899
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P06540_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.16.9e-12126175554
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                            kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++  l  
  GSMUA_Achr9P06540_001 126 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRIAFLDH 175
                            8999**********************************999988876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-14122186IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.749124180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.7E-13126180No hitNo description
PfamPF001701.1E-10126177IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.7E-12126180No hitNo description
CDDcd147038.73E-22127177No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MAQLPPKIPN NMYPNWPNLA PLLTTPPPPP APRSQPSWVD EFLDFSSAKR GHHRRSLMCI  60
FSDDVPPSSL SGAVPASSSS TPSDHSSMND DKLAEQQPKN ESEEAQSACK AEPQPAAGTD  120
TAVDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSVTTLQ TEVSALSPRI AFLDHQRSLL  180
TLGNSHLKQR IAALAQDGIF KDAHQEALKK EIERLRQVYH QQNLKKMAPP SSEPAMSAEK  240
ELLS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009416522.11e-150PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K45e-84BZP61_ARATH; Basic leucine zipper 61
TrEMBLM0TY131e-177M0TY13_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P06540_0011e-178(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.14e-70bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]