PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P04960_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 397aa    MW: 45944.6 Da    PI: 9.9778
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P04960_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.33e-5371351129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+ +yL++++++ ++++ ++i+evdiyk++PwdLp k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+
  GSMUA_Achr9P04960_001   7 LPPGFRFHPTDEELILHYLRNQAASLPCPV-SIIAEVDIYKLDPWDLPGKAVFGEREWYFFSPRDRKYPNGVRPNRAAASGYWKATGT 93 
                            79****************************.89***************7777899********************************* PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                            dk+++++ ++e +g+kk Lvfy+gr pkg+kt+W+mheyrle
  GSMUA_Achr9P04960_001  94 DKPIHDSrGNERIGVKKALVFYEGRPPKGSKTNWIMHEYRLE 135
                            *****9867778****************************85 PP
2NAM109.15e-3425834435129
                    NAM  35 kevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122
                            k +d++++ePwdLp+k+k +ekewyfF++rd+ky+        t +g+Wkatgkdkev++ +g lvg+kktLvfy+grapkgekt+Wv
  GSMUA_Achr9P04960_001 258 KPMDLNRCEPWDLPSKAKMGEKEWYFFCRRDRKYP--------TGAGFWKATGKDKEVFRGRGVLVGMKKTLVFYRGRAPKGEKTNWV 337
                            5679**********99999***************9........568****************************************** PP

                    NAM 123 mheyrle 129
                            mheyrle
  GSMUA_Achr9P04960_001 338 MHEYRLE 344
                            *****85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-655163IPR003441NAC domain
PROSITE profilePS5100562.1597163IPR003441NAC domain
PfamPF023654.0E-278134IPR003441NAC domain
PROSITE profilePS5100538.123220372IPR003441NAC domain
SuperFamilySSF1019413.27E-40259372IPR003441NAC domain
PfamPF023654.5E-16267343IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MSDPASLPPG FRFHPTDEEL ILHYLRNQAA SLPCPVSIIA EVDIYKLDPW DLPGKAVFGE  60
REWYFFSPRD RKYPNGVRPN RAAASGYWKA TGTDKPIHDS RGNERIGVKK ALVFYEGRPP  120
KGSKTNWIMH EYRLEEARRS NCYKLKHASM RLDDWVLCRI YKKKGNLQPV PPSMDDRERQ  180
DPADSASSSF HGMNRALSMA DLMEDYSAPS HLFANLPVMQ GSELGFLRAQ PRMDHQLLRP  240
GNIDGSSDFH YQLARQKKPM DLNRCEPWDL PSKAKMGEKE WYFFCRRDRK YPTGAGFWKA  300
TGKDKEVFRG RGVLVGMKKT LVFYRGRAPK GEKTNWVMHE YRLEGTSMSI PDLPKSAKAR  360
TDEWVVCRVF HKDTGHSKTH CRAWKATLCQ MTYWMQK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-72637816171NO APICAL MERISTEM PROTEIN
1ut4_B7e-72637816171NO APICAL MERISTEM PROTEIN
1ut7_A7e-72637816171NO APICAL MERISTEM PROTEIN
1ut7_B7e-72637816171NO APICAL MERISTEM PROTEIN
3swm_A6e-72637819174NAC domain-containing protein 19
3swm_B6e-72637819174NAC domain-containing protein 19
3swm_C6e-72637819174NAC domain-containing protein 19
3swm_D6e-72637819174NAC domain-containing protein 19
3swp_A6e-72637819174NAC domain-containing protein 19
3swp_B6e-72637819174NAC domain-containing protein 19
3swp_C6e-72637819174NAC domain-containing protein 19
3swp_D6e-72637819174NAC domain-containing protein 19
4dul_A7e-72637816171NAC domain-containing protein 19
4dul_B7e-72637816171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to, and transactivates the promoter of the abscisic aldehyde oxidase AAO3. Promotes chlorophyll degradation in leaves by enhancing transcription of AAO3, which leads to increased levels of the senescence-inducing hormone abscisic acid (ABA) (PubMed:25516602). Involved in the control of dehydration in senescing leaves. Binds to the DNA sequence 5'-CACGTAAGT-3' of SAG113 promoter. SAG113 acts as negative regulator of ABA signaling for stomatal closure in leaves, and controls water loss during leaf senescence (PubMed:22184656). Transcription factor of the NAC family involved in senescence. May function in the transition between active cell division and cell expansion (PubMed:16640597). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:16640597, ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:22184656, ECO:0000269|PubMed:25516602}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by the heterodimer APETALA3 (AP3)/PISTILLATA (PI) (PubMed:9489703). Induced by senescence (PubMed:22184656, PubMed:24659488, PubMed:25516602). Induced by abscisic acid (ABA) (PubMed:22184656, PubMed:25516602). Induced by ethylene (PubMed:25516602). {ECO:0000269|PubMed:22184656, ECO:0000269|PubMed:24659488, ECO:0000269|PubMed:25516602, ECO:0000269|PubMed:9489703}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009416337.10.0PREDICTED: NAC transcription factor 29-like
SwissprotO492552e-83NAC29_ARATH; NAC transcription factor 29
TrEMBLM0TXK50.0M0TXK5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P04960_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123736123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.17e-86NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Zhang K,Gan SS
    An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves.
    Plant Physiol., 2012. 158(2): p. 961-9
    [PMID:22184656]
  2. Zhang K,Halitschke R,Yin C,Liu CJ,Gan SS
    Salicylic acid 3-hydroxylase regulates Arabidopsis leaf longevity by mediating salicylic acid catabolism.
    Proc. Natl. Acad. Sci. U.S.A., 2013. 110(36): p. 14807-12
    [PMID:23959884]
  3. Shinozaki Y, et al.
    Expression of an AtNAP gene homolog in senescing morning glory (Ipomoea nil) petals of two cultivars with a different flower life span.
    J. Plant Physiol., 2014. 171(8): p. 633-8
    [PMID:24709156]
  4. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  5. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  6. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]