PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr8P23510_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 161aa MW: 18296.7 Da PI: 10.1822 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.6 | 7.5e-10 | 82 | 140 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr+ +NRe+ArrsR RK++++ eL+ v L++ ++L ++l++ + ++ se GSMUA_Achr8P23510_001 82 ERKKRRMKSNRESARRSRMRKQKQLSELRSQVMYLQSVHRRLLDQLNRVMRQRDEINSE 140 5789999*****************************************99999888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-11 | 79 | 143 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.3 | 81 | 144 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.8E-7 | 82 | 140 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.9E-8 | 83 | 157 | No hit | No description |
SuperFamily | SSF57959 | 2.41E-9 | 83 | 132 | No hit | No description |
CDD | cd14702 | 4.70E-13 | 84 | 135 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MQQGEVASIH YLSPSNPLSS PAHYGMPQNC VTSFGCGSLF GPRLAQLQAV PMMHDLGLPS 60 SCFGSGATSD EAGDHQASLA EERKKRRMKS NRESARRSRM RKQKQLSELR SQVMYLQSVH 120 RRLLDQLNRV MRQRDEINSE IEKLRDENTE LRRKLENLAA N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 103 | RKKRRMKSNRESARRSRMRKQK |
2 | 83 | 88 | KKRRMK |
3 | 95 | 102 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009414018.1 | 1e-116 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | M0TT04 | 1e-115 | M0TT04_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr8P23510_001 | 1e-115 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15830.1 | 4e-23 | basic leucine-zipper 3 |