PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr8P02020_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | MYB_related | ||||||||
Protein Properties | Length: 38aa MW: 4762.59 Da PI: 10.4702 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.3 | 1.5e-07 | 13 | 37 | 3 | 27 |
SS-HHHHHHHHHHHHHTTTT-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktI 27 +WT eEd+l+ a +++ +g+W+ I GSMUA_Achr8P02020_001 13 PWTREEDKLFEWALAKYKKGDWRNI 37 8*********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.42E-6 | 8 | 37 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.1E-6 | 10 | 37 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.2E-5 | 13 | 37 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 4.96E-4 | 13 | 37 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 38 aa Download sequence Send to blast |
MFSRQFMGMV PRPWTREEDK LFEWALAKYK KGDWRNIL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M0TLV4 | 7e-20 | M0TLV4_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr8P02020_001 | 1e-20 | (Musa acuminata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 3e-08 | Homeodomain-like transcriptional regulator |