PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P23310_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family EIL
Protein Properties Length: 551aa    MW: 62207.2 Da    PI: 4.9504
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P23310_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3283.21e-86663295269
                            XXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   5 krmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                             r w d ++lk+l+e +k ++ ++++   a+  + s+eq+rrkk ++ Q  i+  M    e   aqGfvYgi+p kgkpv+gas++L 
  GSMUA_Achr6P23310_001  66 IRIWLDIIRLKHLNEHHKCKIIQQSS---ASLLDYSQEQSRRKKLAQNQEKIMNEMRELAEEGLAQGFVYGIVPYKGKPVSGASNNLL 150
                            58899999999888877777755554...556679***************************************************** PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                   EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                            +WWke v+f +ngpaai +yq +      ++++ + + s + sl+elqDTtlgSLLsalm  cdppqrrfplekg++pPWWP+ +e+w
  GSMUA_Achr6P23310_001 151 KWWKEIVRFRQNGPAAIREYQTDSSTHFVGKENPS-EFSVPGSLQELQDTTLGSLLSALMPYCDPPQRRFPLEKGIPPPWWPNMSEEW 237
                            ********************777776666666655.8899************************************************ PP

                            HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX CS
                   EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss 265
                            w e+g++kd ++ppykkphdlkkawkvsvL a ikh+ p+ie+i++l ++sk lqdk++ake +++ ++l++e +++  ++ +   ++
  GSMUA_Achr6P23310_001 238 WREMGMPKDPSPPPYKKPHDLKKAWKVSVLIAIIKHLMPDIEKIQRLIEKSKGLQDKITAKEVDIMNAILKHELNKYFGLQHNappPP 325
                            *************************************************************************999887777643222 PP

                            XXXX CS
                   EIN3 266 slrk 269
                            s+++
  GSMUA_Achr6P23310_001 326 SMER 329
                            4433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.9E-9264310No hitNo description
Gene3DG3DSA:1.10.3180.101.0E-58187314IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.81E-50192311IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    Send to blast
MQDKKSKQNV GCSERTDNCS PSVLESIVDP SSELEGLLGP PPDNMFDTRL SDGVETDAHE  60
VERLRIRIWL DIIRLKHLNE HHKCKIIQQS SASLLDYSQE QSRRKKLAQN QEKIMNEMRE  120
LAEEGLAQGF VYGIVPYKGK PVSGASNNLL KWWKEIVRFR QNGPAAIREY QTDSSTHFVG  180
KENPSEFSVP GSLQELQDTT LGSLLSALMP YCDPPQRRFP LEKGIPPPWW PNMSEEWWRE  240
MGMPKDPSPP PYKKPHDLKK AWKVSVLIAI IKHLMPDIEK IQRLIEKSKG LQDKITAKEV  300
DIMNAILKHE LNKYFGLQHN APPPPSMERK SYGETMGDAS SISGIVEQPI SEAMQEESMN  360
VTQYLAMDVN MFTRRNLPNY ELGPQDQPRG SIHQDNLGHI RHSVASASHG NQPLANPYGS  420
YLPMVADNPD LPSGGIEMSR QGTSSSGMNL FQTRLNQDQT LIPEAMEVEI DPLFPSSAQE  480
DAMGTSITRE LANLVQSQIF PSDETVLFES IFENDLDIGS ASCFSIMDRS SRLPDSFHEL  540
DEYDWSKDFG N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-561883101123Protein ETHYLENE INSENSITIVE 3
4zds_B7e-561883101123Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009405820.10.0PREDICTED: protein ETHYLENE INSENSITIVE 3-like
SwissprotQ8W3M07e-97EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
TrEMBLM0T9H90.0M0T9H9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P23310_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.16e-81EIL family protein
Publications ? help Back to Top
  1. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]