PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr1P23640_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 251aa MW: 27527.8 Da PI: 5.2034 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.2 | 1.1e-15 | 84 | 132 | 7 | 55 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +rr+ +NRe+ArrsR+RK+a ++ Le v+ L +eN++L k+l ++e GSMUA_Achr1P23640_001 84 TRRMVSNRESARRSRKRKQAHLADLESQVDLLRGENESLFKQLTDANQE 132 79*************************************9777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.0E-14 | 77 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.88E-12 | 84 | 132 | No hit | No description |
Pfam | PF00170 | 1.2E-12 | 84 | 132 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.8E-11 | 85 | 134 | No hit | No description |
CDD | cd14702 | 1.71E-19 | 85 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 85 | 100 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.415 | 85 | 132 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 6.1E-8 | 149 | 224 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MSAFYVSDGT PTSSHKLLAK ANQTLGGTSG SEQSDEESLE IEGGPCEQST DAIDIKRLRR 60 EGQSRLLFMK KGINQPVFIH EGVTRRMVSN RESARRSRKR KQAHLADLES QVDLLRGENE 120 SLFKQLTDAN QEFTEAVTNN RVLKSNVEAL RIKVKMAEDL VTRGSLACSL DHLLQSSVGS 180 PQFLNPQLPC EESSDFLPTI EFQGDDSSYI GIPTDGRAQN VGMETGNAKT AALSCVTDIW 240 ACDSNTGTML K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 100 | RRSRKRK |
2 | 94 | 101 | RRSRKRKQ |
3 | 96 | 101 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009415024.1 | 1e-175 | PREDICTED: basic leucine zipper 9-like isoform X1 | ||||
Swissprot | Q6H500 | 1e-66 | RSBZ4_ORYSJ; bZIP transcription factor RISBZ4 | ||||
TrEMBL | M0S2H1 | 0.0 | M0S2H1_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr1P23640_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2095 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 5e-50 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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