PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr1P02710_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | NAC | ||||||||
Protein Properties | Length: 272aa MW: 31416.3 Da PI: 8.1556 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.3 | 4.5e-47 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 pGfrFhPt+ el+++yL+ +v+gkkl++ ++i +++iy+++Pw+Lp +k +e+ewyfF++rd++ +g r+nr+t++g+Wkatg+d+ GSMUA_Achr1P02710_001 11 PGFRFHPTEVELLDFYLRSEVQGKKLNF-DIIGRLNIYHYDPWELPGLAKIGEREWYFFVPRDRRIGSGGRPNRTTERGFWKATGSDR 97 9*************************99.99***************8888899*********************************** PP NAM 91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ s ++l+glkktLvfy+grap+g+ktdWvm+eyrl GSMUA_Achr1P02710_001 98 PIRSVadPKRLIGLKKTLVFYRGRAPRGTKTDWVMNEYRL 137 **998767788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 54.813 | 9 | 162 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.11E-56 | 10 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-24 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
MDRKGSELDL PGFRFHPTEV ELLDFYLRSE VQGKKLNFDI IGRLNIYHYD PWELPGLAKI 60 GEREWYFFVP RDRRIGSGGR PNRTTERGFW KATGSDRPIR SVADPKRLIG LKKTLVFYRG 120 RAPRGTKTDW VMNEYRLPES FSSTSTAASA KEDLVLCKIY RKATSLKELE QRAASEEETT 180 RESQICRSVA DTTSISNQDN YRSPSFPSEY TDAKEAEPAK DAEVTSTTFR SVNLPELQVP 240 MYSFDWLQDP LLAQLRSPWV DQWSPFANTL YF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-49 | 6 | 162 | 11 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009390904.1 | 0.0 | PREDICTED: NAC domain-containing protein 35-like | ||||
Swissprot | Q10S65 | 1e-108 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | M0RWH9 | 0.0 | M0RWH9_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr1P02710_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 5e-87 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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