PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P18410_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 277aa    MW: 30435.4 Da    PI: 8.7163
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P18410_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08143190455
                             HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+  Er RR++i +++  L+ l+P +    +k   Ka iL + ++Y++ Lq
  GSMUA_Achr10P18410_001 143 NHSLSERVRRKKISERMKMLQGLVPGC----DKVTGKALILDEIINYVQCLQ 190
                             799***********************9....555***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.22E-9137194No hitNo description
SuperFamilySSF474595.63E-17137205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-16139203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.742139189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.2E-6143190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.7E-9145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MASSHWDSAC VSKTTAEMLL LMPQQQVAVA AAAAAVTDFD SCSSLDTGTD APSADGVIVS  60
SPLSSELHES KKVQNQNQHG RVDHKRKTKD EASLVTGESV GIRDGKSKKQ KRPKGGLKIT  120
EELRSSSDGY VHVRARRGQA TDNHSLSERV RRKKISERMK MLQGLVPGCD KVTGKALILD  180
EIINYVQCLQ NQVEFLSMKI ASLSPVLYDF DVGFADCINQ PQKVITRSIP QPLSYVDQMN  240
HLQAKAFDSG TTTFSQVWSL TQLYPNQEHN AGSKSWT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018675280.10.0PREDICTED: transcription factor bHLH137-like
TrEMBLM0RJB60.0M0RJB6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P18410_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-47bHLH family protein