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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10041128 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 513aa MW: 57613.7 Da PI: 7.6271 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10041128 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 252.4 | 1.7e-77 | 122 | 492 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkfsh 95
lve Ll+ A+ v+++ ++a+al+ +l+sp+g+p+qR ++yf++AL++r+a+++ + ++++ + ++ + +l + ++ +e +P++++++
Lus10041128 122 LVEYLLSSADRVAHNRYHEATALIDLCDHLSSPTGNPVQRTVHYFARALRERVAGETGSDQSTCTINLLDD--DVFRLPSPSVllsVHERFPYFRMQQ 217
5789***************************************************5555555555555553..33333333333348999******** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
l++ q + e++++++++H iD++i+ G++W+ ++qaL +Rp ++ l +T++ g e++e+tge L++fA++ +v+f f+++ ++++++l+
Lus10041128 218 LATVQPMAESAATARKIHCIDLNIKSGIHWIGFMQALETRPdnHKLDLLNVTALCV---GPVERVESTGEWLTDFARAKRVNFCFKIVRVDDVAELDE 312
*****************************************54445599****998...89************************************* PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvEre 288
+++ v ++Ea+ V + ++ +l ++ +e +++++++l+P+++vv+e e +hns+ F +rf+eal +y a fds+ea ++re+ r+ +E
Lus10041128 313 KMFGVGEKEAVLVYSEHSFSAMLGKPDRIEA----LMSAIRRLNPQLMVVTEMEGNHNSSHFGTRFVEALFHYGAAFDSVEACVGREDdVSRRAMEGG 406
**********************966666666....***************************************************997899****** PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
++gr i nvvaceg+er+ r +le Wr ++++ + + +ls+ + +q++l+ ++ ++ +ve + + +++gWk+ pL+s+S W
Lus10041128 407 MMGRMIGNVVACEGRERVIRGVRLEIWRTFFKRFEMVEKRLSTVTWQQMRLVHETACnGRFSTVERDGKGMLIGWKGTPLMSISTW 492
********************************************9999998877766355466667777777************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 513 aa
Download sequence Send
to blast |
MADKDYDVQA QTLGDFSSER MRNINNMPAM TSAATPFQLL TNHDNRSSSS SSSTMTNFMS 60 SAGRKSRQAS PLSIMETINL AAKRILQCSN NSTQVGIPSS LNVHFDPSII GVSFHDQKNV 120 ELVEYLLSSA DRVAHNRYHE ATALIDLCDH LSSPTGNPVQ RTVHYFARAL RERVAGETGS 180 DQSTCTINLL DDDVFRLPSP SVLLSVHERF PYFRMQQLAT VQPMAESAAT ARKIHCIDLN 240 IKSGIHWIGF MQALETRPDN HKLDLLNVTA LCVGPVERVE STGEWLTDFA RAKRVNFCFK 300 IVRVDDVAEL DEKMFGVGEK EAVLVYSEHS FSAMLGKPDR IEALMSAIRR LNPQLMVVTE 360 MEGNHNSSHF GTRFVEALFH YGAAFDSVEA CVGREDDVSR RAMEGGMMGR MIGNVVACEG 420 RERVIRGVRL EIWRTFFKRF EMVEKRLSTV TWQQMRLVHE TACNGRFSTV ERDGKGMLIG 480 WKGTPLMSIS TWNFFRSAKL VPGRKHLRVE FE*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hyz_A | 7e-28 | 156 | 492 | 37 | 374 | GRAS family transcription factor containing protein, expressed |