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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10039166 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 472aa MW: 52990.4 Da PI: 4.2577 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10039166 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 252.9 | 1.2e-77 | 90 | 467 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
lvelL+++ + v+++d +a +lL++ +s g +++qRl++yf +AL r++++++++ +++ a+ + s + P++ +s++
Lus10039166 90 LVELLIAASHKVDAQDYDQAATLLEKCISSSSDGGdSSIQRLVSYFSQALLDRINSQSPGII------------MDDP--ATFMISSCLPTVLVSQFC 173
6899*************************999999679******************777776............2222..223467899********* PP
GRAS 98 aNqaIleavegeervHiiD.fdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledl 189
qaI+++v+g++rvH+iD f+i G+QW L+ aLas + ++ l++T+vg ++ +++++eetg++L++fAe+l+ pf+f++++ ++l+dl
Lus10039166 174 GIQAIVDEVDGAKRVHVIDlFSIRSGAQWTILISALASSSnRSIRALKLTAVGLISYIdydrDQDTIEETGNKLERFAETLDFPFSFRAVMISELNDL 271
*******************77****************88746677*********88878999************************************ PP
GRAS 190 eleeL.......rvkp......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
+ ++L + +E+++V l + +l ++s s+e d+++++vk+++P ++vv+e ea+hns+ F+ rf+eal ++ a f+++ea
Lus10039166 272 NQDMLltlhndyE--DnedeakEEVMVVYLEYVPRQLIRSSPSTEF--DKLMEVVKGINPSIMVVSEIEANHNSSAFAYRFMEALFFFGAYFECIEAC 365
****976666550..1455565888899999999999988888877..************************************************** PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg.yrveeesgslvlgWkdrpLvsv 370
+ + + +r+ vE+++ g++i+++va eg+er r+ l+ Wr+ +e++G+++++++++ +qa+ ++ +v +g +v+ +++slv gWk+ pL sv
Lus10039166 366 MDNGETKRAEVEAMWCGESIRSIVAFEGEERAVRNVPLRGWRMFFERFGMEEIEIGSNCLEQANVVIDNVVgCEGlCTVDMDEKSLVVGWKGMPLHSV 463
*********************************************************************998899899******************** PP
GRAS 371 SaWr 374
SaW+
Lus10039166 464 SAWK 467
***8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MDNINNSSSA TDHDHDRHQP RSTVDPFICY FNYLSNQQQE VSSFSKINHL HDHDQHQLSS 60 EEIIRIAGAR FLNDNDVDSL SDEDTKKVDL VELLIAASHK VDAQDYDQAA TLLEKCISSS 120 SDGGDSSIQR LVSYFSQALL DRINSQSPGI IMDDPATFMI SSCLPTVLVS QFCGIQAIVD 180 EVDGAKRVHV IDLFSIRSGA QWTILISALA SSSNRSIRAL KLTAVGLISY IDYDRDQDTI 240 EETGNKLERF AETLDFPFSF RAVMISELND LNQDMLLTLH NDYEDNEDEA KEEVMVVYLE 300 YVPRQLIRSS PSTEFDKLME VVKGINPSIM VVSEIEANHN SSAFAYRFME ALFFFGAYFE 360 CIEACMDNGE TKRAEVEAMW CGESIRSIVA FEGEERAVRN VPLRGWRMFF ERFGMEEIEI 420 GSNCLEQANV VIDNVVGCEG LCTVDMDEKS LVVGWKGMPL HSVSAWKFIG T*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hyz_A | 2e-27 | 100 | 467 | 13 | 375 | GRAS family transcription factor containing protein, expressed |