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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lus10037756 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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| Family |
GRAS |
| Protein Properties |
Length: 459aa MW: 51775.5 Da PI: 6.2493 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10037756 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 262.3 | 1.7e-80 | 93 | 456 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevsPilkfsh 95
+lLle+Ae v+ gd a+++L++ ++sp+g+p+qRl++y+ +AL+ r+ ++ +++ +++e++ + + ++++ f+ P+ +++
Lus10037756 93 AQLLLEAAEKVARGDS--AETFLENCDLMSSPSGTPIQRLVFYYSRALRVRIGQEIGGIAT---KDQSTEEDlyKVVMTPSFRFveFHRKIPFSPVAQ 185
699**********985..889********************************96666654...4444444422222333333368************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
++ q I+e ve+++++H++Df+i +G QW L+qaLasR+ + +l+iT+v+ k+ +e+ g+ L +fA+e+++p +f+v+++++l++l+ +
Lus10037756 186 FAGIQSIVEHVEKSRKIHVVDFGIRNGHQWTILMQALASRKrRRVKHLKITAVAT---LGKHLIEQRGNMLLSFAQEMNLPCSFHVVMVHDLTELRRD 280
****************************************966677*********...67999*********************************** PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
+++++p+Ea+aV + + +l e+v+ +d+v+++++sl P v+vv+e e++ ns+ F++rf+e++ + sa fd++e ++r++e+ri E +l+
Lus10037756 281 HFEIEPEEAVAVLAEYIINTLT-EPVER---IDSVIRAIRSLYPAVMVVTEMEVNINSPVFVNRFVESFFFASAYFDCFEDCMARDEETRIYGESMLF 374
***************9777776.44443...669**************************************************************** PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
g+ + vva e + r+ ++ Wr ++++G+ +++ls++ qa+l+++kv+ + +++ + +sl+ gWk+ p++sv+aW+
Lus10037756 375 GEGSKVVVAEERSI---RNMKADVWRVYFKRMGMMEAALSQSSLYQAELVVKKVPrWSQCTIDTDGKSLIVGWKGTPILSVTAWK 456
99988888877766...888899********************************9889*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MANKGILIPP PLCVDDFSTD DLDVYDITSF RHLLPQSTSS PARNVIPPRS AALSVEELVR 60
IAASKFILSH SNDSSFHLST TLSDSESESV ELAQLLLEAA EKVARGDSAE TFLENCDLMS 120
SPSGTPIQRL VFYYSRALRV RIGQEIGGIA TKDQSTEEDL YKVVMTPSFR FVEFHRKIPF 180
SPVAQFAGIQ SIVEHVEKSR KIHVVDFGIR NGHQWTILMQ ALASRKRRRV KHLKITAVAT 240
LGKHLIEQRG NMLLSFAQEM NLPCSFHVVM VHDLTELRRD HFEIEPEEAV AVLAEYIINT 300
LTEPVERIDS VIRAIRSLYP AVMVVTEMEV NINSPVFVNR FVESFFFASA YFDCFEDCMA 360
RDEETRIYGE SMLFGEGSKV VVAEERSIRN MKADVWRVYF KRMGMMEAAL SQSSLYQAEL 420
VVKKVPRWSQ CTIDTDGKSL IVGWKGTPIL SVTAWKFC*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 224 | 228 | RKRRR |
| 2 | 225 | 229 | KRRRV |
