PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10033650 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 147aa MW: 16838 Da PI: 9.6279 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.4 | 3e-15 | 22 | 139 | 4 | 104 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeekewyfFskrdkkya.tgkrknra.......tksg 81 +rF+Pt+++lv ++L +k++g+ + + i e+d+y +ePw L + v+ +++ +yf++k ++k+ +g+rk+ k g Lus10033650 22 AIRFRPTEKQLVGQFLLRKIRGTCDPD-DPIVEADLYATEPWLLWEaysssreqshgaDVDDRDEILYFYTKLKSKKLsNGERKSSRidravadGKGG 118 68********************99777.89**************644677776655443333445569999976665436665543324444444489 PP NAM 82 yWkatgkdkevlskkgelvglkk 104 +W++ ++++ +++lv kk Lus10033650 119 TWHQEAV-SKIYV-RHHLVTKKK 139 9**8876.55666.444555444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.23E-14 | 7 | 129 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.851 | 19 | 146 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-8 | 22 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MDADQIMENR KNFFASLNLS SAIRFRPTEK QLVGQFLLRK IRGTCDPDDP IVEADLYATE 60 PWLLWEAYSS SREQSHGADV DDRDEILYFY TKLKSKKLSN GERKSSRIDR AVADGKGGTW 120 HQEAVSKIYV RHHLVTKKKN KQGTFT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10033650 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10033650 | 1e-106 | (Linum usitatissimum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 3e-09 | NAC domain containing protein 45 |
Link Out ? help Back to Top | |
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Phytozome | Lus10033650 |