PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10024907 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 165aa MW: 18735.6 Da PI: 10.0458 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 50.8 | 5.5e-16 | 7 | 130 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlskk 96 p+G+rF+P+ e+++ eyL +kv+g++l+ vi + d+y e w+ +++ +e+yf +k kk+++ gkr r + ++g+W++ +d++v+s + Lus10024907 7 PVGYRFRPSCEQVI-EYLLNKVKGNTLPS--VIFDRDLYGEdEVWKSL-FSETNASELYFCTKLLKKKKKdGKRVVRkVGTNGTWRSN-RDEQVFS-Q 98 89************.9**********988..89999999872455532.344566799998887665554399999956669***976.6789999.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g ++g k+ + + +++++ vm+eyrl Lus10024907 99 GVHIGSKRCFSYQEKEKSAVGGLGFVMDEYRL 130 99***********9999998999*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-17 | 3 | 151 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 20.533 | 6 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-12 | 7 | 130 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence Send to blast |
MRIPGAPVGY RFRPSCEQVI EYLLNKVKGN TLPSVIFDRD LYGEDEVWKS LFSETNASEL 60 YFCTKLLKKK KKDGKRVVRK VGTNGTWRSN RDEQVFSQGV HIGSKRCFSY QEKEKSAVGG 120 LGFVMDEYRL DGVLGGHPEA SEVVICCVRK KLDKKMGKSN RYRL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10024907 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10024907 | 1e-118 | (Linum usitatissimum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-06 | NAC-domain protein 101 |
Link Out ? help Back to Top | |
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Phytozome | Lus10024907 |