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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10023621 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 539aa MW: 61420.8 Da PI: 5.8697 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10023621 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 275.1 | 2.1e-84 | 135 | 519 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svs.elykalppsetsekn...sseelaalklfsevsPilkfs 94
e Ll++Ae v +++++ a alL+ ++s++g+p+qRl ++f +AL+ r++r ++ e+++ p s+ ++++ +++e+a++ + P++++
Lus10023621 135 AEYLLAAAERVGDKQFHHAAALLNLCDAMSSKTGNPVQRLGHCFSRALRDRISRdMGRgEVVDNKPNSPPDPHDsmlTTTEFAIQGMERGEMPMFQVP 232
5789**************************************************64441455555555555554564555555556677889****** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.. 184
hl+ qaIle v++++r+H+iD+ i +G +W+aL+q L sR+ +++p lRiT+v+ ++ + + +++etg+rL++fA+++ +pf+f+++v++
Lus10023621 233 HLVGVQAILENVATSNRIHVIDLRIRNGQHWVALIQGLVSRRsdptNPQPveLLRITAVETSTDECSSSIQETGSRLSDFAKAMSIPFRFEIVVMEdn 330
***************************************99977764455558********9999***************************966556 PP
GRAS 185 rledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.e 280
r++ ++++++ +++ +E+l+V + l rll + + e d+v+k++k+++P+v++ ve ea++ns++F rf+eal +ysa+f+ +e p+ +
Lus10023621 331 RWAGFKPDRFGLNTnEESLVVYSEWGLRRLL----TRPREADRVMKTLKQMKPRVMITVEVEANLNSPNFSGRFVEALFHYSAVFENVECCNPNRDcP 424
9************9899*************9....34444578*********************************************998888888* PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+r ++E ++lg +i+n++a+eg+er r + e Wr+ ++++G+++++ se a+ qakl ++k+ ++ y++ + +s+vlg k+ p++ vS W+
Lus10023621 425 NRETIETVYLGDQISNILATEGDERYLRSVKIEVWRKFFKQFGMEELEPSEAAMHQAKLFMEKYVsEQHYTIGMDGKSMVLGFKTTPMICVSTWK 519
****************************************************************98888*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MDQFSKSTRD FNHVDDDQWL QLQFSPSLPI LDHHEIDGYY SCQRRSNFDL LHKYGFQPVT 60 DSAPPPPQAA PLIEQLEEEE MNEVPLSAEE VVRIAGMRIV QHSSRKAGSP SMLQIPFDPS 120 LSYLSHQDLK NVELAEYLLA AAERVGDKQF HHAAALLNLC DAMSSKTGNP VQRLGHCFSR 180 ALRDRISRDM GRGEVVDNKP NSPPDPHDSM LTTTEFAIQG MERGEMPMFQ VPHLVGVQAI 240 LENVATSNRI HVIDLRIRNG QHWVALIQGL VSRRSDPTNP QPVELLRITA VETSTDECSS 300 SIQETGSRLS DFAKAMSIPF RFEIVVMEDN RWAGFKPDRF GLNTNEESLV VYSEWGLRRL 360 LTRPREADRV MKTLKQMKPR VMITVEVEAN LNSPNFSGRF VEALFHYSAV FENVECCNPN 420 RDCPNRETIE TVYLGDQISN ILATEGDERY LRSVKIEVWR KFFKQFGMEE LEPSEAAMHQ 480 AKLFMEKYVS EQHYTIGMDG KSMVLGFKTT PMICVSTWKF VQLARLASTK RDLRVEFY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hyz_A | 4e-31 | 153 | 519 | 22 | 375 | GRAS family transcription factor containing protein, expressed |