|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10022664 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
Family |
GRAS |
Protein Properties |
Length: 463aa MW: 52121.7 Da PI: 4.272 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10022664 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 129.7 | 3.3e-40 | 94 | 461 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
+lL + ea+++g+ ela+ ++a +se +sp+gdp++Rl + + + L ++ a+ ++++ ++ +a+++f++++P+ +f+h++aN+
Lus10022664 94 HLLKAYGEAMEAGQGELADVIMASVSEKVSPAGDPLERLGFNLSKDLYNKEAD---------YIEQEA---AKNFESAFRAFYQIFPYGRFAHFAANS 179
78888899*********************************988888888777.........233333...56778899******************* PP
GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.............skeeleetgerLakfAeelgvpfefnvlvak 184
aI e++ + ++vHi Dfdi++G+QWp+ ++aLa g s+ +T+v ++++ s + ee++ rL +f +++g+++e++ +
Lus10022664 180 AIIESIPADvQTVHIFDFDIGEGVQWPPVIEALAG--MGNKSVTLTAVTWETETetesdledgdwwpSMWNFEEVKGRLMDFSDRVGLKMEIHGV--- 272
******9999************************9..5778999****98777778999*******9999************************8... PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk.sl..sPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklp 276
r+ dl+ ++ ++k + + n+++ l ++ + ++ +e+L++ s+ s+ +v+ e + ++ ++ e f + + yy +l++s+e ++p
Lus10022664 273 RIGDLKKKTKKFKLKQWCVFNCMILLPHMRRVRGREVI--SEFLSTAGeSIseSAGIVTRGEGGepWEEeSDVKLGEFFERNMVYYRSLLESIELSFP 368
9999*999999999***************966655555..9***99852442267899988876453332666788888889**************** PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF...kpvplsekaakqaklllrkvk.sdgyrve..eesgslvlgWkdrpLv 368
+ +e+r+ +E ++++ i++ +e ++W e+ +ea ++ ++s++ ++ak ++++ + g r+ +++++vl W++ pLv
Lus10022664 369 ELAEARMALECLFVAPYISS------------REWIRRWTEMTTEAVVavgEKWNVSKESLEEAKEMVKERQtAFGVRIGghGRENEMVLEWNGTPLV 454
************88888763............23455666666665442227899*****************778888876567************** PP
GRAS 369 sv.SaWr 374
v S Wr
Lus10022664 455 RVrSIWR 461
7769997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MINPPPSFTD LQPSEDDDMD IIINTSIHHF SDQLSPDCSS DGLAMITLST EELLMNISDT 60 NNSDASPMET AISTDSLDIP SEETELGNQV SVFHLLKAYG EAMEAGQGEL ADVIMASVSE 120 KVSPAGDPLE RLGFNLSKDL YNKEADYIEQ EAAKNFESAF RAFYQIFPYG RFAHFAANSA 180 IIESIPADVQ TVHIFDFDIG EGVQWPPVIE ALAGMGNKSV TLTAVTWETE TETESDLEDG 240 DWWPSMWNFE EVKGRLMDFS DRVGLKMEIH GVRIGDLKKK TKKFKLKQWC VFNCMILLPH 300 MRRVRGREVI SEFLSTAGES ISESAGIVTR GEGGEPWEEE SDVKLGEFFE RNMVYYRSLL 360 ESIELSFPEL AEARMALECL FVAPYISSRE WIRRWTEMTT EAVVAVGEKW NVSKESLEEA 420 KEMVKERQTA FGVRIGGHGR ENEMVLEWNG TPLVRVRSIW RQ*
|