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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10018100 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 471aa MW: 53024.4 Da PI: 7.7608 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10018100 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 264.6 | 3.4e-81 | 81 | 451 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....fsevsPilkfs 94
lv+ Ll++A+ +++++ + + L +s++g+ ++Rl++yf++AL++r+++++ ++ + ++ ++ n++e+++a + + P+++++
Lus10018100 81 LVQCLLNAANEMDHEKYDQSIRSLDICDSSSSKTGNLTERLVHYFAQALRTRVYNKSGGVPLSSVVEGFEQLNVEEAVTAPSPivglIYSKIPFYQVG 178
6899***************************************************776665555555555445444444442233449999******* PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
+l+ qaI+++v++++r+HiiD+ i +G+QWpaL+qaL +R+ ++ l+iT+++ + ++ ++etgerL+++A+++++pf+f+++v++++ +++
Lus10018100 179 QLVGVQAIVDSVKKSKRIHIIDLRIRNGMQWPALMQALITRSrRDLLVLKITAIVT---SCEDLVNETGERLSRLAKSMNIPFSFKTVVVTSILEIDQ 273
******************************************66667********9...689************************************ PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
++++++p+E +++ + ++lh l ++ +le ++ +++++ P ++vv+e+ea++ns+sF++rf+e l yy+a fd++++ l ++++++++vE ++
Lus10018100 274 SRFDLDPREEVVIFSEYALHGLIPDQIQLEA----LMIVIRNIHPAIMVVIEKEANLNSSSFAHRFVEVLFYYAAYFDCIDTCLDSNDKNKMVVESMF 367
***********************88888888....*************************************************************** PP
GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
l+ ++ ++ +e+a+ r t Wr+ ++++ + +++ls +a+++++ ll+ + + +v+ ++ slv gWkd p++s+S W+
Lus10018100 368 LNAQVNGILVKEKAM--RRSVTIDVWRKFFGRFWMVEATLSPRAMDTVNVLLNSFLgGSCCTVDMNRRSLVVGWKDTPIFSLSTWK 451
**************9..788999********************************98888*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MFHSPNLPTE TDDQTLGNQS LFSPVSVELL RKVVERIRTT SEQDISLPDI IRIAAARFIG 60 SSSEPPDLPP SNKVVTKEVE LVQCLLNAAN EMDHEKYDQS IRSLDICDSS SSKTGNLTER 120 LVHYFAQALR TRVYNKSGGV PLSSVVEGFE QLNVEEAVTA PSPIVGLIYS KIPFYQVGQL 180 VGVQAIVDSV KKSKRIHIID LRIRNGMQWP ALMQALITRS RRDLLVLKIT AIVTSCEDLV 240 NETGERLSRL AKSMNIPFSF KTVVVTSILE IDQSRFDLDP REEVVIFSEY ALHGLIPDQI 300 QLEALMIVIR NIHPAIMVVI EKEANLNSSS FAHRFVEVLF YYAAYFDCID TCLDSNDKNK 360 MVVESMFLNA QVNGILVKEK AMRRSVTIDV WRKFFGRFWM VEATLSPRAM DTVNVLLNSF 420 LGGSCCTVDM NRRSLVVGWK DTPIFSLSTW KFLRAKPHKP AKNKEKMNTC *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 1e-31 | 111 | 450 | 49 | 378 | Protein SCARECROW |
5b3h_A | 2e-31 | 111 | 450 | 48 | 377 | Protein SCARECROW |
5b3h_D | 2e-31 | 111 | 450 | 48 | 377 | Protein SCARECROW |