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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lus10016892 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
| Family |
GRAS |
| Protein Properties |
Length: 461aa MW: 51917.6 Da PI: 6.2017 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10016892 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 263.2 | 8.9e-81 | 93 | 458 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fsevsPilkf 93
l++lLle+Ae v gdl a+++L++ ++sp+g+p+qRl++y+ +AL+ r+ + e+ ++s+++ + + + ++++ f+ P+ ++
Lus10016892 93 LTQLLLEAAEKVGRGDLDSADTFLEKCDLQSSPSGTPIQRLVFYYSQALRVRICH---EIGGEQSSSSEE--EglyKVVMTPSFRFveFHRQIPFSQV 185
579***************************************************9...333222222222..1223333344444467********** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
++++ q I e ve+++++H+iDf+i +G QW L+qaLasR+ + +l+iT+v+ k+ +e+tg+rL + A+e+++p +f+v+++++l++l+
Lus10016892 186 AQFAGIQSIIEHVEKSRHIHVIDFGIRNGHQWTILMQALASRKrRRVKHLKITAVAT---LGKHLIEQTGKRLLSCAQEMNLPCSFQVVMVHDLTELR 280
******************************************966677*********...67999********************************* PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
++++++++Ea+aV + l +l e+v+ +d+v+++++sl P+v+vv+e e+++ns+ F++rf+e+l + sa fd++e + r +e+r+ E +
Lus10016892 281 RDHFEIETEEAVAVLANHILNTLT-EPVE--R-IDSVIRAIRSLYPTVMVVTEVEVNMNSPVFVNRFVESLFFASAYFDCFEDCMDRGEEARVYGESM 374
*****************9888886.4443..3.669************************************************************** PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
l+g+ ++vv++e++ r ++ Wr ++++G+ ++ ls + qa+l+ +kv+ + +v+ + +sl+ gWk+ p++sv+aW+
Lus10016892 375 LFGEG-SKVVMAEERY--IRSIKADVWRVYFMRVGMVEAVLSRSSLYQAELVAKKVPcWSQCTVNTDGKSLIVGWKGTPILSVTAWK 458
88876.6777777654..799999*********************************9999*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MIFSTSKLPA PPPPLSVEDY TTNDLLHIEI TSFRNLLAQR TSSPVINDVI PPPLSVEELV 60
RIAASKFILS RSNDSSFHLS TTLSDSESES VELTQLLLEA AEKVGRGDLD SADTFLEKCD 120
LQSSPSGTPI QRLVFYYSQA LRVRICHEIG GEQSSSSEEE GLYKVVMTPS FRFVEFHRQI 180
PFSQVAQFAG IQSIIEHVEK SRHIHVIDFG IRNGHQWTIL MQALASRKRR RVKHLKITAV 240
ATLGKHLIEQ TGKRLLSCAQ EMNLPCSFQV VMVHDLTELR RDHFEIETEE AVAVLANHIL 300
NTLTEPVERI DSVIRAIRSL YPTVMVVTEV EVNMNSPVFV NRFVESLFFA SAYFDCFEDC 360
MDRGEEARVY GESMLFGEGS KVVMAEERYI RSIKADVWRV YFMRVGMVEA VLSRSSLYQA 420
ELVAKKVPCW SQCTVNTDGK SLIVGWKGTP ILSVTAWKFS *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 226 | 230 | RKRRR |
| 2 | 227 | 231 | KRRRV |
