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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lus10016891 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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| Family |
GRAS |
| Protein Properties |
Length: 460aa MW: 51854.8 Da PI: 6.3812 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10016891 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 248.6 | 2.4e-76 | 94 | 457 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....fsevsPilkfsh 95
+lLl++Ae v gd a++++ + + l+sp+g+p+qRl++y+ +AL+ r+ r e+ +++ +++e++ ++++ ++ f+ P+ +++
Lus10016891 94 AQLLLQAAEKVGRGD--SAETFIDKCEMLSSPSGTPIQRLVFYYSRALRVRIGR---EIGGIVTKDQSPEEDLYKVVMTPSFrfveFHRRIPFSPVAQ 186
689******999987..5889*********************************...55555555555555533333333333368************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
++ q I+e ve+++ +H+iDf+i +G QW L+qaLasR+ + +l+iT+v+ k+ +e+ g+ L +fA+++++p +f+v+++++l++l+ +
Lus10016891 187 FAGIQSIVEHVEKSQNIHVIDFGIRNGHQWTILMQALASRKrRRVKHLKITAVAT---LGKHLIEQRGNMLLSFAQAMNLPCSFHVVMVHDLTELRHD 281
****************************************966677*********...67999*********************************** PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
+++++p+Ea+aV + + +l e+v+ +d v+++++sl P v+vv+e e+++ns+ F++rf+e+l + sa fd++e + r++e+r+ E +l+
Lus10016891 282 HFKIEPEEAVAVLAEYIINTLT-EPVER---IDLVIRAIRSLYPIVMVVTEMEVNMNSPVFVNRFVESLFFASAYFDCFEDCMDRDEEARVYGESMLF 375
**************99777775.44443...66****************************************************************9 PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
g+ + vva e + r+ ++ Wr ++++G+ + +ls++ qa l+++kv+ + + +++sl+ gWk+ p++sv+aW+
Lus10016891 376 GEGSKVVVAEERSI---RNMKADVWRIYFKRVGMVEEALSQSSLYQAGLVVKKVPcWSQCTFGTDEKSLIVGWKGTPILSVTAWK 457
99988888877766...888899********************************9999*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 460 aa
Download sequence Send
to blast |
MANKDIMIPP PLCVDGFSTD DLDVYDITSF RNLLAQRTSS PVVTNVIPPR NAALSVEELV 60
RIAASKFILS HSNDSSFHLS TTLSDSESDS VELAQLLLQA AEKVGRGDSA ETFIDKCEML 120
SSPSGTPIQR LVFYYSRALR VRIGREIGGI VTKDQSPEED LYKVVMTPSF RFVEFHRRIP 180
FSPVAQFAGI QSIVEHVEKS QNIHVIDFGI RNGHQWTILM QALASRKRRR VKHLKITAVA 240
TLGKHLIEQR GNMLLSFAQA MNLPCSFHVV MVHDLTELRH DHFKIEPEEA VAVLAEYIIN 300
TLTEPVERID LVIRAIRSLY PIVMVVTEME VNMNSPVFVN RFVESLFFAS AYFDCFEDCM 360
DRDEEARVYG ESMLFGEGSK VVVAEERSIR NMKADVWRIY FKRVGMVEEA LSQSSLYQAG 420
LVVKKVPCWS QCTFGTDEKS LIVGWKGTPI LSVTAWKFC*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 225 | 229 | RKRRR |
| 2 | 226 | 230 | KRRRV |
