PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10016884 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | bZIP | ||||||||
Protein Properties | Length: 141aa MW: 15873.6 Da PI: 4.8974 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.2 | 1e-09 | 10 | 46 | 4 | 40 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k+ +r+++NRe+ArrsR RK+++ie L + ++Le Lus10016884 10 EKKRKRMISNRESARRSRMRKQKQIEDLIAEKAVLER 46 6999************************999888875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-11 | 7 | 71 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-11 | 8 | 91 | No hit | No description |
PROSITE profile | PS50217 | 9.772 | 9 | 72 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.0E-8 | 10 | 48 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.11E-8 | 11 | 57 | No hit | No description |
CDD | cd14702 | 6.08E-13 | 12 | 63 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 14 | 29 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MSAAAAIDEE KKRKRMISNR ESARRSRMRK QKQIEDLIAE KAVLERSLSE ANQKLSGLWQ 60 RYRHLEAENE SLRDEMARLT EYSASLNRML ASYNGTESGM DDDVSDGKDV EEAASTAAFQ 120 NPWSDFTVQS SSAQLVTDCF * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 30 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10016884 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002314935.1 | 3e-32 | basic leucine zipper 1 | ||||
TrEMBL | A0A3G1CGI7 | 8e-31 | A0A3G1CGI7_POPCN; BZIP transcription factor | ||||
TrEMBL | B9HWY9 | 8e-31 | B9HWY9_POPTR; Uncharacterized protein | ||||
STRING | Lus10016884 | 9e-98 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15536 | 8 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49450.1 | 4e-21 | basic leucine-zipper 1 |
Link Out ? help Back to Top | |
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Phytozome | Lus10016884 |