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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10012236 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 523aa MW: 59306.8 Da PI: 4.4045 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10012236 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 135.1 | 7.4e-42 | 152 | 521 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
lL + ea++ ++ +la+ ++a +se +sp+gd+++Rla+ + + L++ + ++++ ++ aa+++f++++P+ +f+h++aN+a
Lus10012236 152 LLKAYGEAMEGDHIQLAEVIMASVSEKVSPAGDSLERLAFNLSQDLRKEVDY----------IKQEA---LKNYEAAFRAFYQIFPYGRFAHFAANSA 236
6677789999*************************************99998..........34444...667778999******************* PP
GRAS 102 Ileavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..........skeeleetgerLakfAeelgvpfefnvlvakrled 188
++e++ + e +Hi+Dfdi++G+QWp+ +++L+ R +g s+ + +v++ + + ee+++rL++ +++g+++e++ + ++l +
Lus10012236 237 MVESIPIAtESIHIVDFDIGEGVQWPPVIDTLS-RMRGVKSVNLMAVNDWGEMefseaelgcpAMWNFEEVKRRLRDHSNRVGLKMEIRGIRIEDLRE 333
*****98889**********************7.67899999999*9996666777888888888899**********************95555555 PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksl...sPkvvvvveqeadh..ns.esFlerflealeyysalfdsleaklprese 280
++ ++k+ E + n+++ l ++ +v +++ de+L+l ++l s +v+ e ea n+ + F f + +eyy +l++s+e ++p+ +e
Lus10012236 334 EMERRKKMKKLEWCVFNCMVGLPHMR--RVRSRKLVDEFLELGNELvneSGGIVTRGEGEAWEslNDcSGFGSFFERNMEYYRSLLESIELNFPELAE 429
5555557788***************7..78888889****998888444678*******9533246525788888999******************** PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvS.aWr 374
+r+ +E ++++ i+ v + + ++ e +++ ++ ++ ++s++ ++ak ++++ s g r+ +e +++vl Wk+ pLv vS Wr
Lus10012236 430 ARMALECLFVAPFISAVGWFRRWS---EM--SEIQNKKEGAPTVRKWRVSKESLEEAKEMMNERMtSYGVRIGgDEGDEMVLEWKGSPLVKVSsTWR 521
********9999998776665555...33..3333455566778999***********99999887999999856678899*********9862576 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 523 aa
Download sequence Send
to blast |
MTNLQEELLN NQSSWPFYNM INSHFDHDQS YGHDHSPTDF PLPPTSDDMD DIMADSSFHQ 60 FSSMLTDDVS QHSDDGLGMM NMMVTLSTDE LLMGLDQFDP NFTDSEAYSS AIPSPSLSPS 120 TSILSNSAIE VASLNIPGEG SELGNEISVF NLLKAYGEAM EGDHIQLAEV IMASVSEKVS 180 PAGDSLERLA FNLSQDLRKE VDYIKQEALK NYEAAFRAFY QIFPYGRFAH FAANSAMVES 240 IPIATESIHI VDFDIGEGVQ WPPVIDTLSR MRGVKSVNLM AVNDWGEMEF SEAELGCPAM 300 WNFEEVKRRL RDHSNRVGLK MEIRGIRIED LREEMERRKK MKKLEWCVFN CMVGLPHMRR 360 VRSRKLVDEF LELGNELVNE SGGIVTRGEG EAWESLNDCS GFGSFFERNM EYYRSLLESI 420 ELNFPELAEA RMALECLFVA PFISAVGWFR RWSEMSEIQN KKEGAPTVRK WRVSKESLEE 480 AKEMMNERMT SYGVRIGGDE GDEMVLEWKG SPLVKVSSTW RN*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 335 | 343 | ERRKKMKKL |