PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10011557
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 129aa    MW: 15074.5 Da    PI: 12.394
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10011557genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.3e-111155549
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                 ++ rr+ +NRe+ArrsR RK++ +e+L+++v  L  eN++L +++
  Lus10011557 11 RKRRRMVSNRESARRSRMRKRKHLENLRNRVNRLRVENQELTDRV 55
                 6789***********************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-10771IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.53972IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-9965No hitNo description
PfamPF001702.7E-91155IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.64E-111159No hitNo description
CDDcd147022.83E-141259No hitNo description
PROSITE patternPS0003601429IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MGPVPSMIEE RKRRRMVSNR ESARRSRMRK RKHLENLRNR VNRLRVENQE LTDRVRFVSY  60
HLNRVRTNTD RLRSEHIMLR RKLSNVGHIL MLRQLSSASS TAWPCNNMIF PAVPSAATAE  120
QIPSLITS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11014RKRRR
21231RRRMVSNRESARRSRMRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10011557
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079592.12e-48basic leucine zipper 4
TrEMBLA0A067KIL33e-47A0A067KIL3_JATCU; Uncharacterized protein
STRINGLus100115571e-86(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-09basic leucine-zipper 5