|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lus10002204 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
Family |
GRAS |
Protein Properties |
Length: 523aa MW: 59381.8 Da PI: 4.3615 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10002204 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 141.8 | 6.8e-44 | 150 | 521 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
lL + ea++ +++ela+ ++a +se +sp+gd+++Rla+ + + L++ + ++++ ++ +a+++f++++P+ +f+h++aN+a
Lus10002204 150 LLKAYGEAMEGDHMELAEVIMASVSEKVSPAGDSLERLAFNLSQDLRKEVDY----------IKQEA---LKNYESAFRAFYQIFPYGRFAHFAANSA 234
66677899999************************************99998..........34444...667778999******************* PP
GRAS 102 Ileavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..........skeeleetgerLakfAeelgvpfefnvlvak..rl 186
++e++ + e +Hi+Dfdi++G+QWp+ +++L+ R +g s+ +T+v++ + + ee+++rL + +++g+++e++ + + r
Lus10002204 235 MVESIPIAtESIHIVDFDIGEGVQWPPVIDTLS-RMRGVKSVNLTAVNDWGEMefsetelgcpAMWNFEEVKRRLVDHSNRVGLKMEIRGIRIEdlRE 331
*****98889**********************7.678999********97666787888888888889**********************94441233 PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksl...sPkvvvvveqeadh..ns.esFlerflealeyysalfdsleaklpre 278
e+ + ++ ++k+ E + n+++ l ++ +v +++ de+L+l ++l s +v+ e ea n+ + F f +eyy +l++s+e ++p+
Lus10002204 332 EMERRKNKKMKKLEWCVFNCMVGLPHMR--RVRSRKLVDEFLELGNKLvneSGGIVTRGEGEAWEslNDcSGFGSFFEGNMEYYRSLLESIELNFPEL 427
333556667788***************7..78888889****999888444667********533246625677777779****************** PP
GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvS.aW 373
+e+r+ +E ++++ +++eg rr + e ++ ++ +k+ ++s++ ++ak ++++ s g r++ ee +++vl Wk+ pLv vS +W
Lus10002204 428 AEARMALECLFVAP----FISAEGWFRRWSE-MGEIQDKKEGAPTMKKWRVSKESSEEAKEMVNERMtSYGVRIDgEEGEEMVLEWKGSPLVKVSsVW 520
********996665....6788988744332.23333455567789*****************99998999999977888999*********986268 PP
GRAS 374 r 374
r
Lus10002204 521 R 521
6 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 523 aa
Download sequence Send
to blast |
MTNLQEEFLN IQPSWPFYNV INSHFDHDQS YGHDHSPTDF PLPPTSDDME DIMADSSFHQ 60 FSSILTDDVS QHSDDGLGMM NMMVTLSTDE LMMGLDQFDP SFTDSEANSN YPSPSPIQSP 120 SLSNSAMEVA NLNIPGEGSE LGNEISVFNL LKAYGEAMEG DHMELAEVIM ASVSEKVSPA 180 GDSLERLAFN LSQDLRKEVD YIKQEALKNY ESAFRAFYQI FPYGRFAHFA ANSAMVESIP 240 IATESIHIVD FDIGEGVQWP PVIDTLSRMR GVKSVNLTAV NDWGEMEFSE TELGCPAMWN 300 FEEVKRRLVD HSNRVGLKME IRGIRIEDLR EEMERRKNKK MKKLEWCVFN CMVGLPHMRR 360 VRSRKLVDEF LELGNKLVNE SGGIVTRGEG EAWESLNDCS GFGSFFEGNM EYYRSLLESI 420 ELNFPELAEA RMALECLFVA PFISAEGWFR RWSEMGEIQD KKEGAPTMKK WRVSKESSEE 480 AKEMVNERMT SYGVRIDGEE GEEMVLEWKG SPLVKVSSVW RN*
|