PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Lsa019207 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 164aa MW: 18306.6 Da PI: 5.6935 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.8 | 3e-10 | 34 | 92 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR R+++ +e L +L + N+ + ++++ +++ ++++e+ Lsa019207 34 RKRKRMVSNRESARRSRMRRQKHLEDLMIQLSQLRKDNSLVIANVSTTIQHYTSVETEN 92 678999********************************988888888777777776665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.8E-10 | 24 | 113 | No hit | No description |
SMART | SM00338 | 1.7E-12 | 30 | 94 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.599 | 32 | 95 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.03E-9 | 34 | 85 | No hit | No description |
Pfam | PF00170 | 1.8E-7 | 34 | 88 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.12E-16 | 35 | 85 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 37 | 52 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence Send to blast |
MASSSGTATT SSGGSYPLQI SGSDEDIQQL MDQRKRKRMV SNRESARRSR MRRQKHLEDL 60 MIQLSQLRKD NSLVIANVST TIQHYTSVET ENSVLRAQVA ELSHRLESLN QIMALMNQPI 120 DAGCGFVEEQ YGMGGTELID EFMVNSLSSF YANQPILASA DMIQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 33 | 54 | RKRKRMVSNRESARRSRMRRQK |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_023769704.1 | 1e-118 | bZIP transcription factor 11-like | ||||
TrEMBL | A0A2J6L130 | 1e-117 | A0A2J6L130_LACSA; Uncharacterized protein | ||||
STRING | XP_010105351.1 | 2e-50 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75390.1 | 6e-31 | basic leucine-zipper 44 |