PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Lsa003521 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | bZIP | ||||||||||||
Protein Properties | Length: 147aa MW: 16490.6 Da PI: 10.0394 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.1 | 1.9e-08 | 59 | 97 | 12 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 NR+A r++R++Kka+ + Lee+vk+L N+ L+ +l+ Lsa003521 59 GNRVAVRKYREKKKAQNAYLEEEVKKLRVANRGLIRKLQ 97 5*********************************98875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-9 | 45 | 116 | No hit | No description |
Pfam | PF07716 | 1.3E-8 | 59 | 105 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 6.02E-6 | 60 | 97 | No hit | No description |
SuperFamily | SSF57959 | 1.91E-5 | 60 | 114 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MEDGETEFSD HHTGNSSNTC STPPKLETSL LEGTMKKRRT ITKTHTDDHA SVKPAKSSGN 60 RVAVRKYREK KKAQNAYLEE EVKKLRVANR GLIRKLQIQA ALEAEAVRLR RLLLNLKAQI 120 GYELSVSPFY KQNCNGSSDG CSGRDEQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023766081.1 | 1e-105 | basic leucine zipper 24-like | ||||
TrEMBL | A0A2J6L8M5 | 1e-103 | A0A2J6L8M5_LACSA; Uncharacterized protein | ||||
STRING | EOY17552 | 3e-29 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51960.1 | 1e-14 | basic leucine zipper 24 |