PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lsa001806 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | bZIP | ||||||||
Protein Properties | Length: 188aa MW: 22182.6 Da PI: 5.5578 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.3 | 9.3e-15 | 75 | 128 | 5 | 58 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +++rr+++NRe+ArrsR RK++ ++eL v L eN++L ++l++ + + ++ Lsa001806 75 RKQRRMISNRESARRSRMRKQKHLDELWSQVIWLRDENHQLVDKLNKFSGTHDQ 128 689***************************************999987766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.7E-14 | 71 | 135 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.358 | 73 | 136 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.3E-12 | 75 | 148 | No hit | No description |
SuperFamily | SSF57959 | 2.75E-13 | 75 | 123 | No hit | No description |
Pfam | PF00170 | 6.1E-13 | 75 | 133 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.84E-19 | 76 | 123 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 78 | 93 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MQPGENSHYL YIPNPNPDTT NLTMNLQNSP ILQFNINTPS NPFYNHHIHP QYQEISPYFS 60 DEADDQQQIN LINERKQRRM ISNRESARRS RMRKQKHLDE LWSQVIWLRD ENHQLVDKLN 120 KFSGTHDQVL QENAQLKEEA SELREMVNKL QLNGTYPSLI DLDDINSNVL YLRNESLNPS 180 ISSSSEFF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 94 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023765547.1 | 1e-136 | basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 4e-35 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2J6LA30 | 1e-116 | A0A2J6LA30_LACSA; Uncharacterized protein | ||||
STRING | VIT_14s0083g00700.t01 | 2e-65 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-46 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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