PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR09G10860.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 516aa    MW: 56823 Da    PI: 7.1103
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR09G10860.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.7e-11182225141
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  LPERR09G10860.1 182 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 225
                      6777999************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-8178230No hitNo description
SMARTSM003387.2E-8182276IPR004827Basic-leucine zipper domain
PfamPF001703.4E-8183225IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082184226IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-7186227No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
PfamPF141442.4E-26285357IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MMRGSGHLQE MMNMSFGMMN NHYHHHPAAS SSSSSSMQAA SSFMSSKEAS GGGAYDNLGE  60
LDHALFMYMD NGGVSSHQEQ RQTLNIFPSQ PMHVEPTPKG EIGLVLSPAP VGSKMPRSSS  120
PDDDDHHQQQ QAAAMEELAT GSRRQDHHLQ HQPFAANPAG INRDVKPVTA KKDHRRTVST  180
GERDPKTLRR LAQNREAARK SRLRKKAYIQ QLESSRIRLA QLEQELHTAR AQGVFFPGSS  240
SLLAESGAAS KGSLPLGSID SPLSSEAAMF DVEYARWQEE HYRLMYELRS AIQQQLGDGE  300
LQMYVDSCVA HHAEVAAIKE GVIKGDVFHL ISGVWRSPAE RCFLWMGGFR PSEAIKMQMM  360
LSHVEPLTEQ QIVAVYGLQQ SAMETEEALS QGLDALYQSL SDSVVSDALS CPSNVANYMS  420
QMAVAMNKLS NLENFIHQAE NLRQQTLHRL QQVLTPRQMA RSLLAFSDYF HRLRTLSSLW  480
LTRPRHPAAH VVDQPPSAAA AAAAPSAAAS AVGPHT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR09G10860.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015696815.10.0PREDICTED: transcription factor TGA2-like
SwissprotQ52MZ21e-160TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0D9XF370.0A0A0D9XF37_9ORYZ; Uncharacterized protein
STRINGLPERR09G10860.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-118bZIP family protein