PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G08730.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 469aa    MW: 48887.3 Da    PI: 6.4183
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G08730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3452.6e-14108234129255
                      .XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T..TT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGG CS
             EIN3 129 rsseshslselqDTtlgSLLsalmqhcdppqrrfpl..ekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmspt 220
                      rs     +sel D  l  +++ l + c+ppq  +pl  +  + pPWWPt +e+ww++lg+ +    p  k  + l ka k +   a +k ++p+
  LPERR07G08730.1 108 RSPLAAAVSELSDHVLEGMMKVLGKKCMPPQDVYPLlgKSPTHPPWWPTENEAWWPQLGADAVA--PVHKPTRLLSKAEKEAAVVAMVKIIAPD 199
                      5666778999*************************95456799*************99976554..4444455579****************** PP

                      HHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT CS
             EIN3 221 ieeirelerqskylqdkmsakesfallsvlnqeek 255
                      +e + +  r+ +++   m+  e  a+ + ++ e +
  LPERR07G08730.1 200 FETVFKALRKARSVSGAMTDTEASAWHAGVSAECD 234
                      **************************998876644 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.101.2E-30108234IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.3E-15112230No hitNo description
SuperFamilySSF1167682.88E-33113232IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MDATKESVMR MGKQEEQKVS PAAAIPAAAA AAVTVYPAGT KEQDKAASVT TPSAATNAHH  60
APPPPPPSPA SALVASGGRV AEKEMENAGG GSSGGGVAAA AAAVAGQRSP LAAAVSELSD  120
HVLEGMMKVL GKKCMPPQDV YPLLGKSPTH PPWWPTENEA WWPQLGADAV APVHKPTRLL  180
SKAEKEAAVV AMVKIIAPDF ETVFKALRKA RSVSGAMTDT EASAWHAGVS AECDAYVPPP  240
RQVSLWPEAS RARKRKAPAP KTRTPVAQAY AEIRPTIVLA LVAPGVTSAV DIAPAPARVV  300
NLSAVVEIED MNDKSKTPAL ALAIENPVVW RVYNRIAGKE NSEKGNGSCV AGESAICHNA  360
GAEMTGNPEA GESSMNPGTV MQPNAEMSIN LETGGSSSKP CILLQPNAGL KTEDQVEAET  420
NSKTESGSEY EEAKASEIIS NQDSRAMLQS NKAETAKSRY LLVFNNFGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-161152326123Protein ETHYLENE INSENSITIVE 3
4zds_B4e-161152326123Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G08730.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9WXN30.0A0A0D9WXN3_9ORYZ; Uncharacterized protein
STRINGLPERR07G08730.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP159701112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.18e-14ETHYLENE-INSENSITIVE3-like 1