PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G08420.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 346aa    MW: 35567.9 Da    PI: 10.4756
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G08420.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3582.9e-1879246109271
                      XXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TT..T--HHHH---S--HHHHHHT--TT--.-----GGG CS
             EIN3 109 iskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfple..kgvepPWWPtGkelwwgelglskdqgtppykkphd 200
                      +++++ +n+  s++ +  +ers     +s l D  l  +++ lm+ c+ppq  fpl     v pPWWP+G+e ww+elg+     +ppy+  + 
  LPERR07G08420.1  79 VAEEEMENAGGSSSGGAAVERSPLAAAVSALSDQVLERMMKVLMRKCNPPQDAFPLTgkSPVMPPWWPKGNEGWWPELGAG--AVAPPYRPARV 170
                      556666666667677778999***********************************6326789*************99976..4578******* PP

                      --HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.....XXXXXX CS
             EIN3 201 lkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.....slrkqs 271
                      l k+ k     a +k ++p++e++         + + m+  e +a+ + +  e + +  v a +       lr+ +
  LPERR07G08420.1 171 LSKVEKEVAVVAMVKNIAPDFEHLAMAIQMASTVTSVMTDAEAAAWDAGVAAEHDAYVAVGAAPVtragsLLRSIK 246
                      ***999666678899**********99999999999*****************99999998884433553333322 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.104.0E-3699228IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048733.3E-19104221No hitNo description
SuperFamilySSF1167685.49E-39104226IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MDASKESVTR MGKQEEQQVS PAAKPAATGA AVTSNPAGIK QQDKATSVAT PFAATSAHHA  60
PPPPPPSPAS ALVASGGRVA EEEMENAGGS SSGGAAVERS PLAAAVSALS DQVLERMMKV  120
LMRKCNPPQD AFPLTGKSPV MPPWWPKGNE GWWPELGAGA VAPPYRPARV LSKVEKEVAV  180
VAMVKNIAPD FEHLAMAIQM ASTVTSVMTD AEAAAWDAGV AAEHDAYVAV GAAPVTRAGS  240
LLRSIKPEAV RMKKRKEPTP AKKKTPPVAD TRTVVLALPA PSAPLARRPV GIPAHRLRHF  300
TTAPAAAATA ARGAPARSGG RASIPAVVEV EAAVREMANL KAPGAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-1710522311128ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G08420.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646400.22e-64uncharacterized protein LOC107276281
TrEMBLA0A0D9WXK30.0A0A0D9WXK3_9ORYZ; Uncharacterized protein
STRINGLPERR07G08420.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP159701112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.12e-13ETHYLENE-INSENSITIVE3-like 1