PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR06G09070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | bZIP | ||||||||
Protein Properties | Length: 458aa MW: 49691.1 Da PI: 7.3918 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.8 | 3e-10 | 171 | 212 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k +rr+++NReAAr+sR RKka+i++Le +L + ++L LPERR06G09070.1 171 QKTQRRLEQNREAARKSRMRKKAYIQQLESSRSKLANLEQEL 212 589**************************9888887776655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-8 | 168 | 266 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 9.4E-8 | 170 | 214 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.864 | 170 | 214 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.31E-8 | 172 | 215 | No hit | No description |
CDD | cd14708 | 2.19E-21 | 172 | 224 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-9 | 172 | 216 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 175 | 190 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.0E-28 | 256 | 332 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009909 | Biological Process | regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MHHHSSHVFR AEEQSGGGTA GYNHIGDGAI FLPPLLHPDL PLLRTSPNPI SKSSSSLTAG 60 NNFPPPLAGG NQHGVVVGMA AAPGMATATA TDRFCLPRMA AAAAAASQLE NWGDSGVVVS 120 STFTDDTSTD VDDTADKHHH HALMGGGGGG CRGELRGAIF SAVSKEKTGD QKTQRRLEQN 180 REAARKSRMR KKAYIQQLES SRSKLANLEQ ELQRARQQGI FITTGGSGDH GQSIGGNGTL 240 AFDMEYARWL DDHQRHINDL RVAMNAPIGD DDLRVLVDGV MAHYDHVFRL KGLATKIDVF 300 HVLSGMWLSP AERFFMWLGG FRSSELLKVL ASHLEPLTDQ QLMGICNLQQ SSQQAEDALS 360 QGMEALQQTL ADTLASAAAA AGGVDNVTNY MGHMAVAMAK LTTLENFLRQ ADLLRQQTLQ 420 QMHRILTTRQ AARALLVISD YFSRLRALSS LWLARPRD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR06G09070.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK109719 | 0.0 | AK109719.1 Oryza sativa Japonica Group cDNA clone:002-146-A04, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015642106.2 | 0.0 | transcription factor TGAL3-like isoform X3 | ||||
Swissprot | Q5Z6N9 | 0.0 | TGAL3_ORYSJ; Transcription factor TGAL3 | ||||
TrEMBL | A0A0D9WP39 | 0.0 | A0A0D9WP39_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR06G09070.1 | 0.0 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP486 | 38 | 185 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-110 | bZIP family protein |
Publications ? help Back to Top | |||
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