PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR02G10510.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 312aa    MW: 34696.5 Da    PI: 4.7212
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR02G10510.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.3e-18101331128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrk.nr.atksgyWkatgkdk 90 
                      l pG++F+Ptde lv  yL + + ++  l+l+ v+   d +++ Pw+L  +++++++ + yf +++  + + g+r+ +r ++  g W ++ + k
  LPERR02G10510.1  10 LSPGYKFEPTDEMLVELYLLPFLYNNGqLPLTGVVFPDDPTQFPPWELLDRHDKGDEGLaYFIIPTPASGRGGRRQvSRsVAGGGKWIKQRRRK 103
                      579******************97766548998888888**********87777777766488887777776665542566778999**998865 PP

              NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +         + k +L f+  ra+ g +t Wvmhey++
  LPERR02G10510.1 104 AFA-------WEKYSLSFH-RRARGGGSTGWVMHEYAV 133
                      554.......689******.6999999*********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-264148IPR003441NAC domain
PROSITE profilePS5100522.00910148IPR003441NAC domain
PfamPF023655.2E-1412132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MVTAAEAHGL SPGYKFEPTD EMLVELYLLP FLYNNGQLPL TGVVFPDDPT QFPPWELLDR  60
HDKGDEGLAY FIIPTPASGR GGRRQVSRSV AGGGKWIKQR RRKAFAWEKY SLSFHRRARG  120
GGSTGWVMHE YAVVGVGATH SLCRVAFTGH GQNRQRVVDG YVVGDVDVDE QMVEYAANGE  180
EEIGYDCVQA VLEQDRNVNA YEQHGQEAVA GSQQFVDQEM GNQDQDYNGY CYYNEQSQQQ  240
QEARLVDGGG TVNEDGELAV ATPAPARHYN GPVPVLDDAF MENMRARLTA VVLQDKNENL  300
AWMMTIINRG AK
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR02G10510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649258.14e-41uncharacterized protein LOC107275324
TrEMBLA0A0D9VEW60.0A0A0D9VEW6_9ORYZ; Uncharacterized protein
STRINGLPERR02G10510.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143261123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.11e-08NAC family protein