PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR01G26750.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family VOZ
Protein Properties Length: 559aa    MW: 62084 Da    PI: 5.1791
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR01G26750.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ430.13.1e-1322594761217
              VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                      p+p+afl+pkcalwdc+rpaqgse++qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip+cegaatakspwna+
  LPERR01G26750.1 259 PAPTAFLRPKCALWDCPRPAQGSERWQDYCSMYHADLAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPVCEGAATAKSPWNAP 352
                      89*************************************9879*************************************************** PP

              VOZ  94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187
                      elfdl ++ege+irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein++da+alyrle+
  LPERR01G26750.1 353 ELFDLYIFEGESIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDCDAFALYRLEF 446
                      ********************************************************************************************** PP

              VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217
                      k++d+kk+ak+k+++++l+++q++++rl+a
  LPERR01G26750.1 447 KSSDAKKTAKSKIACNPLNEIQQQMVRLSA 476
                      ****************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MGKGPAVARS SSGAARHQQF RARAKTRVDD LQEMFSGLQS ARKESRSTDA AVLEAQLHQM  60
LREWRAELSG NNRELSDPPS ETLRMLQLAA AEEEDDATSK LVEQQHQQSA NQAHHGHAQG  120
GQEMKPEPPE EAVAAPADLA AAAAQQQQSP GYGVLLNGGG MLAPAAAAAA AAVFHDQMYY  180
VNQELTVEDF LYDDNYKMYL SGSSPDVLNN LEGTGQLEYP QFNLTQELPP NAYLDMSNCG  240
QSAGDAFLHM SDLLTTMSPA PTAFLRPKCA LWDCPRPAQG SERWQDYCSM YHADLAVKEE  300
GPPGTMPVIR PRGIDLKDGP LFAALSAKIQ GKHVGIPVCE GAATAKSPWN APELFDLYIF  360
EGESIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVMKDFGGL KRSYYMDPQP  420
SSSYEWHLYE YEINDCDAFA LYRLEFKSSD AKKTAKSKIA CNPLNEIQQQ MVRLSADSPV  480
EIKRSARSRT KANQNDINSN IYSVQNTTAQ GSVPNTYQAV SQVDQMTYLN GNVVYGPHLP  540
YGYSTERSDF YWNSNDGEA
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR01G26750.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2417650.0AK241765.1 Oryza sativa Japonica Group cDNA, clone: J065205E23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015688108.10.0PREDICTED: transcription factor VOZ1
TrEMBLA0A0D9V5R20.0A0A0D9V5R2_9ORYZ; Uncharacterized protein
STRINGLPERR01G26750.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23433888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-122vascular plant one zinc finger protein