PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR01G04680.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family BES1
Protein Properties Length: 168aa    MW: 18141.1 Da    PI: 10.2006
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR01G04680.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221358e-42491492101
           DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspessl 94 
                      +s r+pt++ErEnn++RERrRR++aa+iyaGLRa ++y+lpk aD+n+Vl+ALc+eAG++v+dDG++ rk  +pl + +  +gss+++ + ss+
  LPERR01G04680.1  49 TSLRHPTARERENNRQRERRRRQVAARIYAGLRAGAGYALPKYADQNDVLRALCAEAGYLVDDDGNVTRKN-EPLgDGSGRVGSSSDQLQVSSY 141
                      789******************************************************************76.566588899999999******9 PP

           DUF822  95 q.sslkss 101
                      +  +  + 
  LPERR01G04680.1 142 SgATEAAV 149
                      93322222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-3051148IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MEGSSVREEA AVAVSSPAAK ATGGRRGCIR STRGPWTVRR TGRGGAVTTS LRHPTARERE  60
NNRQRERRRR QVAARIYAGL RAGAGYALPK YADQNDVLRA LCAEAGYLVD DDGNVTRKNE  120
PLGDGSGRVG SSSDQLQVSS YSGATEAAVA QHREQEISLE LTLSFTYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-1152118372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-1152118372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-1152118372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-1152118372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR01G04680.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025879038.12e-62BES1/BZR1 homolog protein 4-like
TrEMBLA0A0D9UXF91e-117A0A0D9UXF9_9ORYZ; Uncharacterized protein
STRINGLPERR01G04680.11e-118(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.18e-08BES1/BZR1 homolog 2