PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj4g3v2820120.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family EIL
Protein Properties Length: 344aa    MW: 40050.4 Da    PI: 7.8157
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj4g3v2820120.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3364.12.5e-111292962284
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                       lk+rmw+d++ll++lke+ +      e++++ak     +e++rrkkmsraQD+iLk+M+k+mevcnaqGfvYgiipekgkpv+g+s+sLr+WW
  Lj4g3v2820120.1  29 KLKERMWRDRILLQKLKEKGE------EPELEAK-----QEASRRKKMSRAQDSILKHMMKIMEVCNAQGFVYGIIPEKGKPVTGSSESLRQWW 111
                      589***********8887665......5667776.....7****************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--T CS
             EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lsk 188
                      ke+v+f +n+p a++k  +   +l++++    +++s+ h l++lqDTtlgSLLsalmqhc ppqrrfple+g++pPWWP+G+e+wwge+g l++
  Lj4g3v2820120.1 112 KEDVKFTKNAPSALTKFFP---LLENQE---FDPNSYIHLLNDLQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPKGTEQWWGEQGfLAQ 199
                      ***************9933...455433...469************************************************************ PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrkqspkvtlsceqk 281
                      +qg+ppy+kphdlkkawkvsvL+avik msp+++++r+ + qsk lq km+ak+  ++++v+nqee++++   ++ +    +q +kv ++++++
  Lj4g3v2820120.1 200 EQGPPPYRKPHDLKKAWKVSVLAAVIKNMSPNLDRVRRFVTQSKTLQGKMTAKDISTWSKVMNQEEALLKIPPSDHKdGNCQQGTKVEFDNDDD 293
                      ******************************************************************9886555554445566899999999888 PP

                      XXX CS
             EIN3 282 edv 284
                      +d 
  Lj4g3v2820120.1 294 DDY 296
                      775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.5E-11129265No hitNo description
Gene3DG3DSA:1.10.3180.105.8E-65141269IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.83E-56143268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MVKIIEEMDL FDEQVTGFTE DDEQIDYDKL KERMWRDRIL LQKLKEKGEE PELEAKQEAS  60
RRKKMSRAQD SILKHMMKIM EVCNAQGFVY GIIPEKGKPV TGSSESLRQW WKEDVKFTKN  120
APSALTKFFP LLENQEFDPN SYIHLLNDLQ DTTLGSLLSA LMQHCVPPQR RFPLERGLAP  180
PWWPKGTEQW WGEQGFLAQE QGPPPYRKPH DLKKAWKVSV LAAVIKNMSP NLDRVRRFVT  240
QSKTLQGKMT AKDISTWSKV MNQEEALLKI PPSDHKDGNC QQGTKVEFDN DDDDDYSIYV  300
RRGRTCLIYM MLLLLLLMIR CILVNMLSVL RVICVWDFLI KVQG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-551412691128Protein ETHYLENE INSENSITIVE 3
4zds_B5e-551412691128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj4g3v2820120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0064190.0AP006419.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT43O18, TM0307, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236916.11e-149putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9FJQ51e-121EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLK7L6K01e-146K7L6K0_SOYBN; Uncharacterized protein
STRINGGLYMA08G14630.21e-147(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-117EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]