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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj3g3v3639760.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
GRAS |
| Protein Properties |
Length: 589aa MW: 64656.1 Da PI: 5.3192 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj3g3v3639760.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 359.5 | 4.8e-110 | 214 | 589 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvse..lykalppsetseknsseelaalklfsevsPilkf 93
++L+ecA++ ++ + +a + L++ls+ +s++g+p+qR+a+yf +AL ++++ ++++ + ++ +++ +++ s+e + ++k++++++P+ kf
Lj3g3v3639760.1 214 LKALTECARFAET-EPDQAMESLTHLSKSVSQQGNPTQRVAFYFSQALTRKISAETQKlkVNDKNSATGLEPTASEELILSYKALNDACPYSKF 306
689******6655.8889999********************************955541156666777777888******************** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
+hltaNqaIlea+eg++r+Hi+Df+i qG+QW+aLlqa+a+R++g+p s+Ri g+ +++ g + +l++tg+rL++fA+ lg++f f++ + +
Lj3g3v3639760.1 307 AHLTANQAILEATEGATRIHIVDFGIVQGIQWAALLQAFATRSSGKPqSIRISGIPAMALGtsPSSSLSATGNRLSEFAKLLGLNFVFTP-ILT 399
*******************************************77666*********99889999*************************.799 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
+++l+ +++ ++p+EalaVn++lql++llde+ + + + L+l ksl+P++v++ e ea++++ F+ rf al+++salf+sle +lp++
Lj3g3v3639760.1 400 PIHELNESSFCIEPNEALAVNFMLQLYNLLDETPTAVE---TALRLAKSLKPRIVTLGEYEASLTRVGFVSRFKAALKHFSALFESLEPNLPSD 490
******************************99999999...9**************************************************** PP
GRAS 279 seerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvs 369
s er vE llgr+i v+ e rer+e +e+Wr +e++GF++v+ls++a +qak ll +++ s y++ e++ ++ l Wkd pL++
Lj3g3v3639760.1 491 SPERFQVESLLLGRRIAGVIGPELPGcVRERMEDKEQWRVLMESCGFESVSLSHYAISQAKILLWNYSySSLYSLVESQPGFLtLAWKDVPLLT 584
***********************988789***************************************9999**9999877777********** PP
GRAS 370 vSaWr 374
vS+Wr
Lj3g3v3639760.1 585 VSSWR 589
****8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 589 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QKQQQEQEQQ QQQQQQQQQH QQHQQMLGIN PLSLTHPWSI 60
HNTPPHLGFP LTGNDFPDPF QVGSGPDNAD PAFQFPPPLD PHSAAAFRFS DFDSDDWMDT 120
LMAGADSTTD PPPPDFALNP FSSCPTRLSS PSDLNRVIFT SESQVTTTIP LQLPTTPPTL 180
SKDTPPPPPP PAKTTLHRDA AAAAETASSP HPLLKALTEC ARFAETEPDQ AMESLTHLSK 240
SVSQQGNPTQ RVAFYFSQAL TRKISAETQK LKVNDKNSAT GLEPTASEEL ILSYKALNDA 300
CPYSKFAHLT ANQAILEATE GATRIHIVDF GIVQGIQWAA LLQAFATRSS GKPQSIRISG 360
IPAMALGTSP SSSLSATGNR LSEFAKLLGL NFVFTPILTP IHELNESSFC IEPNEALAVN 420
FMLQLYNLLD ETPTAVETAL RLAKSLKPRI VTLGEYEASL TRVGFVSRFK AALKHFSALF 480
ESLEPNLPSD SPERFQVESL LLGRRIAGVI GPELPGCVRE RMEDKEQWRV LMESCGFESV 540
SLSHYAISQA KILLWNYSYS SLYSLVESQP GFLTLAWKDV PLLTVSSWR
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP007572 | 0.0 | AP007572.2 Lotus japonicus genomic DNA, chromosome 3, clone: LjT30G11, TM0757, complete sequence. |
