PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v2838540.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 342aa    MW: 38954 Da    PI: 5.3225
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v2838540.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.3e-11207254552
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                      kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  ++  l
  Lj3g3v2838540.1 207 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAYL 254
                      899**********************************88887666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-14203267IPR004827Basic-leucine zipper domain
PfamPF077162.1E-9204254IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.726205257IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-11207261No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-11207258No hitNo description
CDDcd147031.06E-23208258No hitNo description
PROSITE patternPS000360210225IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MAQLPPKVPT MSPSWPDFSS SHHQKMPSMN GGINNNHNPS WVDEFLDFSS ARRGAHRRSV  60
SDPVAFLEMP MLDKHGGRNN VHDDGEFDKF DDEQFMSMFN DEISGVHNMP PPPPTKTATL  120
STSNPSSPEE QNFVNDEKET KKEVEEQKKK EEEEEEEEEE EEACHHLQQQ LKNEPDEVES  180
QCEQENPQGS NNTSATNSSN DRITDPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTSL  240
QAEVSVLSPR VAYLDHQRLL LNVDNSALKQ RIAALAQDKI FKDAHQDALK REIERLRQVY  300
HQQSLKKMEN AAAGSPLPSP STKPTMCDNT THTEKEQQLL HA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v2838540.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0049770.0AP004977.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjT12A10, TM0160, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487182.11e-147basic leucine zipper 34-like
SwissprotQ9M2K41e-113BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2Z6M3F41e-148A0A2Z6M3F4_TRISU; Uncharacterized protein
STRINGXP_004487182.11e-147(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-108bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]