PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v2364690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 29626.8 Da PI: 9.769 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 58.8 | 1.1e-18 | 211 | 252 | 1 | 42 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa 42 ++DgynW+ Y K+vk se+ +sYY+Ct+++Cpv+k+vers Lj2g3v2364690.1 211 VEDGYNWKQYEEKNVKRSENQKSYYKCTYPNCPVRKRVERSI 252 58**************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.0E-15 | 203 | 252 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.778 | 206 | 251 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-15 | 209 | 252 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-13 | 211 | 260 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-14 | 212 | 251 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005794 | Cellular Component | Golgi apparatus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MPIPISNLIQ KRLWRLVGFM SSVIGLASYA LSSSFKHLFG EWNFFKITVY AVVSFSISSL 60 MLFLKKWKLS RSFLLKVHSG VLVLLLTSFY SFVSDKDVSG KPDMLSLISC AAFAVMSLCL 120 SKQIDLGFGA DLLNFFLGCL TVQLMKINLM LSIFAAIFCY CLMVLRSKLD SQTQIGTLRM 180 EDHVAVDIDA ADQGQRRGNG HRQIQSLTRR VEDGYNWKQY EEKNVKRSEN QKSYYKCTYP 240 NCPVRKRVER SIVGETMETL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v2364690.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027333695.1 | 1e-128 | uncharacterized protein LOC113848406 | ||||
TrEMBL | A0A1S2XKG0 | 1e-126 | A0A1S2XKG0_CICAR; uncharacterized protein LOC101503578 isoform X1 | ||||
STRING | XP_004490676.1 | 1e-127 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14743 | 10 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 3e-18 | WRKY DNA-binding protein 33 |