PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v4703010.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 477aa    MW: 52619.9 Da    PI: 7.9399
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v4703010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.31.7e-08126188163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      eke +r rr   NRe+Ar   +R++a  eeL++k+++L  eN+ Lk e e   ke+++l++ +
  Lj1g3v4703010.1 126 EKEARRIRRVLANRESARQTIRRRQALSEELTRKAATLVMENENLKREKELALKEYQSLETTN 188
                      799*******************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.5E-7126188IPR004827Basic-leucine zipper domain
SMARTSM003384.1E-8126190IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703128191IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-5130185No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-4130194No hitNo description
CDDcd147022.54E-13131182No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MDVDSDKRSS SSFSFSSSPS SSPSCASEEE IEAAETLAHL ALRHVDDKCC TTAANNAIRH  60
SPTPHTLITP AGQGVAGQQQ LDEKMEHDDC LGPVKVEQDA ELPTRTTTSH SSVRCSKSRR  120
NLTEEEKEAR RIRRVLANRE SARQTIRRRQ ALSEELTRKA ATLVMENENL KREKELALKE  180
YQSLETTNKH LKAQIAKSIN TEVQKTPVEQ ESSVAEGAPV YGNSPWVLYN HFPVTQLFWP  240
SILQSPSPVQ LQHTPFNSIA IPPNVYVPCS SESESHHKQN NLIDNRTQNP LYMFPCPWLH  300
PLPEFGNGQS PPSTSLKDKL DKPPGKNCRT SLSLNTAANV DYQPAPPIKL KTEASGLTEA  360
RSVNGPVHAT PSFSLDGGEQ KSKCHIVEKF RRPALGCNGH ASAVKQEPEL QLHSAPNTKA  420
SSTASHTAAS SLEREQEQFT SLGQNLVDAV AAGEARKRRK ELTKLKSIHN LQSRMEC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1455460RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v4703010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014629391.10.0uncharacterized protein LOC778152 isoform X1
TrEMBLA0A445FIP90.0A0A445FIP9_GLYSO; Uncharacterized protein
TrEMBLK7MZ800.0K7MZ80_SOYBN; Uncharacterized protein
STRINGGLYMA19G37801.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-39bZIP family protein