PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v4315340.3
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 408aa    MW: 45165.8 Da    PI: 7.0234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v4315340.3genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10202231534
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                      k  rr+++NReAAr+sR+RKka++++Le  
  Lj1g3v4315340.3 202 KTLRRLAQNREAARKSRLRKKAYVQQLESS 231
                      7789***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.7E-9196243No hitNo description
SMARTSM003381.6E-6198272IPR004827Basic-leucine zipper domain
PfamPF077168.0E-8199243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22200244IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.19E-7202244No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
PfamPF141445.3E-31294368IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MMASSVKNNT NPTTTQLQPL PPPQQHRHPH HLFQHHHHHH QTPEHQISFG MMQPSSSSSV  60
PGNYLLSKDS GAYDLGELDQ ALFLYLDGQA GEPSSVNQDQ QRQNNSSSSG MRPPTLNIFP  120
SQPMHVEPSS SNSKALSIDL VNSSQTSGSK RAISEPSMEL ANPRNEAASA PEPPKGVKQR  180
VSIGKGPTSS SEHEGPKTPD PKTLRRLAQN REAARKSRLR KKAYVQQLES SRIRLNQLEQ  240
ELQRARGQGM FFGGGGAIVA GEQGLPVPMN STSSEAAIFD VEYGRWLEEH HRLVCELRAA  300
VQEHLPEDEL RMFVNNCLAH YDQVMNLKCL VAKTDVFHVF SGMWKTPAER CFMWIGGFKP  360
SELIKIVLTQ IEPLTEQQIL AICGLQQSTQ EGEEALSQGL EALNQSLA
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v4315340.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017416967.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ52MZ21e-177TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0L9U7L80.0A0A0L9U7L8_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RXK00.0A0A0S3RXK0_PHAAN; Uncharacterized protein
STRINGXP_004493558.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-135bZIP family protein