PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v2035100.2
Common NamebZIP-R91
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 303aa    MW: 33245.7 Da    PI: 6.1622
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v2035100.2genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.53.8e-15131183355
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      ++kr rrk +NRe+ArrsR+RK+a ++eLe+ v++L+ eN +L k+    +++
  Lj1g3v2035100.2 131 DVKRLRRKVSNRESARRSRRRKQAHLAELETQVEKLKLENATLYKQFTDASQQ 183
                      68*****************************************9876655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-14129193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415131194IPR004827Basic-leucine zipper domain
PfamPF001701.9E-12132177IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.1E-9133167No hitNo description
SuperFamilySSF579596.27E-11133183No hitNo description
CDDcd147023.46E-7134185No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.101.6E-4168204No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MASSETADLN EFLNLDYDHL RYPDTADALF NTVCSAAFHN LLPDVVSSFS TCGGVTVTDT  60
LYSQKLTPKC STVTATNDSQ SSICVGSPVS ANKPNMGGEN HLKGTSSGSS DRSDEDDDEA  120
GPCEQSNNPQ DVKRLRRKVS NRESARRSRR RKQAHLAELE TQVEKLKLEN ATLYKQFTDA  180
SQQFREADTN NRVLKSGVEA LRAKVKLAED MVTRSSFTNQ ILQNPCQLST PPQLNSNLRG  240
MAHVSPTITI HGDNASYNGI RVGEQNFSTL GFGNLDHMTY NNNNNVNNIG VISDAMSCVT  300
MWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135151RRKVSNRESARRSRRRK
2145152RRSRRRKQ
3147152SRRRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.31810.0floral bud| pod| root
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Present in silique vasculature and funiculi. In the anthers, restricted to the connective tissue at pre- and post-dehiscence stages and detected in the vascular tissue of the stamen filament. {ECO:0000269|PubMed:18841482}.
UniprotTISSUE SPECIFICITY: Expressed in roots, shoots, stems, young leaves, and flowers, mostly in vascular tissues (e.g. phloem). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:18841482}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v2035100.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB3786290.0AB378629.1 Lotus japonicus bZIP-R91 mRNA for transcription factor bZIP, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004501207.11e-129bZIP transcription factor RISBZ4-like
SwissprotQ9FUD32e-60BZIP9_ARATH; Basic leucine zipper 9
TrEMBLB3IX290.0B3IX29_LOTJA; Transcription factor bZIP
STRINGXP_004501207.11e-129(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-49basic leucine zipper 9
Publications ? help Back to Top
  1. Asamizu E,Shimoda Y,Kouchi H,Tabata S,Sato S
    A positive regulatory role for LjERF1 in the nodulation process is revealed by systematic analysis of nodule-associated transcription factors of Lotus japonicus.
    Plant Physiol., 2008. 147(4): p. 2030-40
    [PMID:18567832]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  5. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]