PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v1650270.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 414aa    MW: 44529.7 Da    PI: 7.9163
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v1650270.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.45e-16351404558
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      +r+rr++kNRe+A rsR+RK+a++ eLe++v++L++eN++L+k+ ee+ ++ ++
  Lj1g3v1650270.1 351 RRQRRMIKNRESAARSRARKQAYTMELEQEVAKLKEENEELQKKQEEIMEMQKN 404
                      69*********************************************9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-13347411IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.645349400IPR004827Basic-leucine zipper domain
PfamPF001704.0E-14351404IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-11351401No hitNo description
CDDcd147072.80E-27351405No hitNo description
Gene3DG3DSA:1.20.5.1706.2E-15351401No hitNo description
PROSITE patternPS000360354369IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MNFKGFVNDP GGADNGNGGG RPPPGGFPLA RQSSVYSLTF DEFMTSMGGS GRDFGSMNMD  60
ELLKNIWSAE EVQSIGGGVG GGGEEGGGGA AVGHLQRQGS LTLPRTLSHK TVDQVWKDIS  120
KDYGPSLVAP PRQPTLGEMT LEEFLVRAGV VREDAKNDAV FADLARAGNN SGLGFEFQAQ  180
QMNRIAGLMG GNNRIPGASD DPIVSLQNST NLPLNANGFR SPNQQQQMQN SHQQNHQQQQ  240
HHQQQQIFPK QPALNYATQM PNQGIRGGIV GLSADQGMNG NLAQGGGIGG LVGLAPGPVQ  300
LASGSPANQM SSSDIMGKSN GDTSSVSPVP YVFNGGLRGR KTGAVEKVIE RRQRRMIKNR  360
ESAARSRARK QAYTMELEQE VAKLKEENEE LQKKQEEIME MQKNQVQEMM NLQR
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}.
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v1650270.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003603049.10.0bZIP transcription factor 46
RefseqXP_024635171.10.0bZIP transcription factor 46
RefseqXP_024635172.10.0bZIP transcription factor 46
SwissprotQ9M7Q41e-110AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLQ0PN110.0Q0PN11_9FABA; BZIP transcription factor
STRINGAES733000.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.17e-93abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]