PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0355209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | NAC | ||||||||
Protein Properties | Length: 124aa MW: 14232.1 Da PI: 4.5301 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.1 | 1.9e-15 | 17 | 97 | 1 | 82 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka.eekewyfFskrdkkyatgkrknratksgy 82 l pG+ F+Ptd+ lv +yL+++v +++l++ ++i+++d++++ePw Lp k +e++++f+ + d+ ++ + +r++ sg Lj0g3v0355209.1 17 LLPGYMFDPTDDVLVEFYLTRRVFAQRLPV-QIIPDFDVFQTEPWGLPgGdgK--IfNERKIFFYNTMDRDLEN--NDERVAGSGH 97 579***************************.89***************53333..2367899999999998765..6677777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.49E-19 | 14 | 117 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.642 | 17 | 124 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-6 | 19 | 97 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence Send to blast |
MEDLVMTYED DDGTVRLLPG YMFDPTDDVL VEFYLTRRVF AQRLPVQIIP DFDVFQTEPW 60 GLPGGDGKIF NERKIFFYNT MDRDLENNDE RVAGSGHLRV IEKGKCVPIP GNNEVKGACA 120 RRTK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-17 | 10 | 107 | 8 | 105 | Stress-induced transcription factor NAC1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0355209.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027352865.1 | 8e-36 | NAC domain-containing protein 83-like | ||||
TrEMBL | A0A371E4A1 | 6e-25 | A0A371E4A1_MUCPR; NAC domain-containing protein 41 (Fragment) | ||||
STRING | XP_004492996.1 | 1e-22 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13413 | 11 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-17 | NAC domain containing protein 83 |