PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0353129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | NAC | ||||||||
Protein Properties | Length: 190aa MW: 21598.9 Da PI: 9.8507 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 88.4 | 1.3e-27 | 20 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 l pG++F+Ptde lv++yLk+++ +++l++ ++i++++++++ePw Lp + +e++++f+ + + ++ r++ sg Wk k k Lj0g3v0353129.1 20 LLPGYKFDPTDEVLVNFYLKRRAFAQPLPV-QIIPNFNVFQTEPWGLPgGdgN--IfNERKCFFYNTMGRDL--ESLDIRIAGSGQWKVVEKGK 108 579***************************.89***************53332..23678899999988876..46899999******666655 PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++e++g k+tL+f++ + +++ t+Wvmhe+rl Lj0g3v0353129.1 109 CIPIRqNNEVIGKKNTLIFWELQGASAKMTKWVMHEFRL 147 5544438899***********9999************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.36E-34 | 17 | 167 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 34.018 | 20 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-15 | 22 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MTSFEMEALI TCDKDGSVRL LPGYKFDPTD EVLVNFYLKR RAFAQPLPVQ IIPNFNVFQT 60 EPWGLPGGDG NIFNERKCFF YNTMGRDLES LDIRIAGSGQ WKVVEKGKCI PIRQNNEVIG 120 KKNTLIFWEL QGASAKMTKW VMHEFRLVLV AKQSKISNWV VYRIFLEKDA QKVKSARGPN 180 GKSSSSGENA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-23 | 13 | 169 | 8 | 170 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0353129.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027352865.1 | 3e-62 | NAC domain-containing protein 83-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13413 | 11 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-33 | NAC domain containing protein 83 |