PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0289579.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 181aa    MW: 21231.9 Da    PI: 9.9958
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0289579.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.23e-1282136559
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                      ++ rr+++NRe+ArrsR RK+  +e+L++ v  +  eN+++k+ l+ l  +  ++
  Lj0g3v0289579.1  82 RKRRRMISNRESARRSRMRKQRHLENLRNQVNLFRVENREMKSGLQFLLHQLNRV 136
                      67899*************************************9998776666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1378142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.74980143IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-980137No hitNo description
SuperFamilySSF579591.34E-1082133No hitNo description
PfamPF001701.3E-982138IPR004827Basic-leucine zipper domain
CDDcd147023.47E-1883134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MLSVSALSTS VDTHVGNPFP TLDGGFTPWD YDYPGFLLSH HKPVMTYSSS GSYHDPYSQT  60
QAEEEKPDPV SSNRFASIMD ERKRRRMISN RESARRSRMR KQRHLENLRN QVNLFRVENR  120
EMKSGLQFLL HQLNRVRTEN DWLRSERTVL LQKLHHISQN LVFQQVQPFS SAWPCNIITT  180
E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18185RKRRR
294101RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0289579.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027362135.19e-76basic leucine zipper 4-like
TrEMBLA0A1S3VQC96e-65A0A1S3VQC9_VIGRR; bZIP transcription factor 53-like
STRINGGLYMA11G04920.22e-64(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.13e-24basic leucine-zipper 5